Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1082 ATGGGTTCTGTTGGAGGGGAAGAGGCAATTCAGGAGCCTACAGGCCATGAAGAGAGGATTCTTGTTTCTGTTCGTCTTCGTCCTCTCAACGATAAGGAGCTTGCAAGAAATGATGTTTCAGACTGGGAATGCATCAATGACACTACTATCATATACAGGAGCAACCTTTCAGCTTCTGACAGGTCACTCTACCCAACAGCATATTCATTTGACAGAGTGTTTAGGTCAGATTGTTCTACAAGACAGGTGTATGAAGAAGCAGCTAAGGATGTTGCTCTTTCAGTTGTCAGTGGCATTAACTCAAGCATTTTTGCATATGGGCAAACAAGCAGCGGAAAGACATTCACCATGAGTGGCATAACTGAATACACTGCGGCAGACATTTTTAACTACATAGAAAAGCACGTGGAAAGAGAATTCATTTTGAAGTTTTCGGCAATTGAGATTTATAATGAATCTGTCAGGGATCTCCTTAGTCCAGACTGTACTCCTCTCAGACTTCTTGATGATCCAGAGAGGGGGACAGTTGTTGAGAGACTGACTGAGGAAACTTTGAGAGACTGGAACCATTTTACAGAACTTATTTCTTTCTGTGAAACTCAAAGGCAGATAGGGGAAACATCACTGAATGAAGCAAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAGAGTTCTGCACGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTTGCAGGAAGTGAGCGTGCATCACAAACCAATTCAGCTGGCACAAGATTGAAAGAGGGTTGCCACATAAATCGTAGTTTACTAACTCTAGGAACTGTTATACGTAAACTCAGCAAGGGGAGAAATGGACACATTCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCATTAGGAGGCAATGCTAGAACTGCTATTATCTGCACCATGAGCCCTGCACGGAGCCATGTGGAACAAACCAGAAACACTCTCTTATTTGCAAGCTGTGCCAAAGAAGTGGCAACTAATGCACAAGTCAATGTAGTGATGTCTGATAAAGCATTAGTCAAGCAATTACAAAAAGAGTTGGTTAGACTGGAAAATGAATTGAGAAATTCAGCATCAGCCCACCTTACATCTGATACTGCAGCATTGTTGAGAGAAAAAGACCGTCAAATTGAGATGTTAAAGAAAGAGGTAAAAGAGCTGGCCTTGCAGCGGGACCTTGCACAATCTCAAATTAAGGACATGATGAAAGTGGCAGAAGATGATGTGTCTTCAATAGAAGTGGAAAGTTTGGATCCTCAATTTCCAAAACTACATGTGAGAAATTCATGGGACTTTGAAAATCAAAGAAAGGAGCGAAACATAACAAGTCTTGACTGTGAGGAGAGTGTGAGGTCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTTAGTTCTGATGAGAACTTGTTTCAACTCCCTGACCTTGAAAAGGATCTTCTGGTCAGAAGTTCTTCCCCAGTGGCGCCAGTTACAAGCATCAACGCTGTACCGATTGATTTGGATCAGAAGAACGTTGAAGATCAGCATGAAGAGGACTGTTGTAAGGAAGTTAGGTGCATTGAGTTAGAAGACCTAATTACAAACACACACCCAAACTCAAAACCCGCAGATTTAAGATCAAATTCATACACTAATTCTGATGCATCATCTCCTTGTGCAAACACAGCTATCTCAGGATTGATTGTAGTTGATAATGGAGACAAATTTAATCGGGATTTGTGTTCATCAGGGTTAAAGGAAGATAAAAGATTGAATCATTTGTGCCACAATTTTCTTCTTCCACCAAAAAACATTTTTCCTTTGTTGACAGAAAACAGTTCAAGTAGTTGTAGAGCCTTGAAGTTGAGCCGAAGTAGAAGTTGTAAAGCCAGTCTCATGAGGAATTTATCTTCAGATTGGTTTGAAGAGGAAGATATAATTCAGAACACACCCCCAATAGGGAATGAAAAAGACTTTATTGGAAGACCTGAGGGTTTTCTGAAGAAGGTTTACGCACTAAATTATGATGCCAATGCAGAGAGGCTTTCATGGAATGGCCATGAGAATTCTATGGAATGTTCAGCTGTTGATGATGTACAAAATGTGAAATACTCCCCTGCCAAGGAAAGTGAGGATAATGGTCCTCTAGCTCCAGAAATAAACGAAATGGAAAATATTAAGAGTTTGAATTTGCTGGCTGACCGTAAGGTTGCGGGGACAGGACTGGATCCCATCATGTCTGCAAAGAATGTCAAAGATGTTGGCTTGGATCCAATGCAAGCTGACGGAGAAAGTCAATCAGACTGGCCCTTAAAATTTAAGAGGCTGCAAAGAGAGATTATTGAACTGTGGGATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTTCAAGGGGACCCATCAGATTCTATTTATATGGAGGTAGAACTGAGAAGACTGTCATTCCTTCAGCACACTTTTTCCCAAGGCAATCAGACCCTGGAAGATGGACGAACCCTCACCCCTGAGTCAAGCATGAGATATCTTAGAAAAGAGAGGCAGATGTTGAGCAAGCAAATTCATAGGCGGCTATCTAAATATGATAGAGAGAACCTATACTTGAAATGGGGCCTTCGTTTGAGTTCCAAGCATAGGAGTTTGCAGTTGGCCCATAACTTGTGGACTGACACAAATGACATGGACCACATTGGAGAGAGTGCAGCAATTGTTGCAAAGCTGGTTGGTTCAGTAGAGCCAGAACAGGCCTTTAAGGAGATGTTTGGGCTCAACTTTGCCCCACGGCCCACAAATAGGAAATCTTTTGGTTGGACATCCACAGTGAGGCACATTTTGTGA 2889 0.4157 MGSVGGEEAIQEPTGHEERILVSVRLRPLNDKELARNDVSDWECINDTTIIYRSNLSASDRSLYPTAYSFDRVFRSDCSTRQVYEEAAKDVALSVVSGINSSIFAYGQTSSGKTFTMSGITEYTAADIFNYIEKHVEREFILKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVERLTEETLRDWNHFTELISFCETQRQIGETSLNEASSRSHQILRLTIESSAREFLGNDKSSSLSASVNFVDLAGSERASQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQKELVRLENELRNSASAHLTSDTAALLREKDRQIEMLKKEVKELALQRDLAQSQIKDMMKVAEDDVSSIEVESLDPQFPKLHVRNSWDFENQRKERNITSLDCEESVRSFDASQYSDGHSFSSDENLFQLPDLEKDLLVRSSSPVAPVTSINAVPIDLDQKNVEDQHEEDCCKEVRCIELEDLITNTHPNSKPADLRSNSYTNSDASSPCANTAISGLIVVDNGDKFNRDLCSSGLKEDKRLNHLCHNFLLPPKNIFPLLTENSSSSCRALKLSRSRSCKASLMRNLSSDWFEEEDIIQNTPPIGNEKDFIGRPEGFLKKVYALNYDANAERLSWNGHENSMECSAVDDVQNVKYSPAKESEDNGPLAPEINEMENIKSLNLLADRKVAGTGLDPIMSAKNVKDVGLDPMQADGESQSDWPLKFKRLQREIIELWDACNVSLVHRTYFFLLFQGDPSDSIYMEVELRRLSFLQHTFSQGNQTLEDGRTLTPESSMRYLRKERQMLSKQIHRRLSKYDRENLYLKWGLRLSSKHRSLQLAHNLWTDTNDMDHIGESAAIVAKLVGSVEPEQAFKEMFGLNFAPRPTNRKSFGWTSTVRHIL* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1082 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Apr7g1082 962 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr7g1082 962 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr7g1082 962 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr7g1082 962 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr7g1082 962 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr7g1082 962 Gene3D Kinesin motor domain 10 374 IPR036961 -
Apr7g1082 962 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 962 - -
Apr7g1082 962 Coils Coil 389 416 - -
Apr7g1082 962 Coils Coil 352 379 - -
Apr7g1082 962 PANTHER CENTROMERE PROTEIN E 2 962 - -
Apr7g1082 962 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr7g1082 962 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr7g1082 962 CDD KISc_CENP_E 20 343 - -
Apr7g1082 962 Pfam Domain of unknown function (DUF3490) 785 944 IPR021881 -
Apr7g1082 962 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1082 Apr-Chr7 17784880 17793125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1082 12 373 Miscellaneous Gene Families AT5G06670 43.514 1.07e-83 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1082 K11498 - gmx:100809766 1570.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0326 3 6502362 6508466 Apr7g1082 7 17784880 17793125 ECH
Apr5g1633 5 19967130 19974636 Apr7g1082 7 17784880 17793125 ECH
Apr7g1082 7 17784880 17793125 Apr7g1082 7 17784880 17793125 ECH
Apr5g1807 5 21367668 21374594 Apr7g1082 7 17784880 17793125 ECH
Apr7g1082 7 17784880 17793125 Apr3g0326 3 6502362 6508466 PCT