Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0326 ATGGGTTCCATTGCAGGGGAGGAGGCAATGCAAAGCCCAACAGGCAGTCATGAGAGGATTCTTGTTTCTGTTCGTGTGCGACCTTTGAATGAAAAGGAGCTCGCAAGAAATGATCTTTCTGAATGGGAATGCATTAATGACACTACCATTATGTACAGGAGCAACCTTTCAGCTTCCGAAAAGTCCCTGTATCCAACAGCCTATACATTTGATCGGGTATTTAGGAACGATTGCCCCACTAGGCAAGTGTATGAAGAAGCAGCTAAGGAAGTTGCTCTTTCAGTTCTCTGTGGCATCAACTCAAGCGTTTTTGCATATGGACAAACAAGCAGCGGAAAAACATTCACCATGAGCGGCATAACAGAGTACACCGTAGCAGATATTTTCAACTACATAGATAAGCACAAGGAAAGGGAATTTGTTTTGAAGTTTTCAGCCATTGAGATCTATAATGAATCTGTAAGGGACCTCCTTAGCACGGACAGTACACCTCTCAGACTTCTTGATGATCCAGAGAAAGGGACAGTTGTTGAGAGACTCACGGAGGAAACTTTGCGGGACTGGAACCATTTTCAAGAACTTATTTCTTTCTGTGAAAATCAAAGGCAGATAGGAGAGACCGCCCTGAATGAAGCAAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAAAGTTCAGCACGTGAATTTCTGGGAAAAGATTCCCTTGCGGCTTCTGTGAATTTTGTTGATCTTGCTGGGAGTGAGCGAGCATCCCAAACTAATTCAGCTGGTGCAAGGTTGAAAGAGGGTTGCCACATAAATCGAAGTTTACTAACACTAGGAACTGTCATCCGCAAATTAAGCAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATTCTACAATCCTCATTAGGAGGCAATGCTAGAACTGCAATCATCTGCACCATGAGTCCTGCAAGGAGCCATGTTGAACAAACCAGAAACACCCTTTTGTTCGCAACTTGTGCTAAAGAAGTGACAACTAATGCAAAAGTCAACGTAGTAATGTCGGATAAGTTGTTGGTCAAGCAATTGCAAAAAGAGTTGGCTAGACTGGAAAATGAGTTGAGAAATTCAGGGTCAAATCGCCAAAAATCTGATTCTGAGGCATTGCTAAGGGAAAAAGACCTCCAAATTAAGATGTTAAAGAAAGAGGTAATGGATCTGACGTTGCAGCGGGACCTTGCTCAATCTCAAATTAAGGACATGCTTCAAGTGGTTGGAGATGATACGTCCTCAACTGAAGTGGAATGTTTGGATCATCAATATCCCAAATTACGTGTGCGAAGTTCATGGGACTTCGAAAGTCGGATACCCGAACATCCAAGTTTTGATGGCATGGAGAGTGTCAGATCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTTAGTTCTGATGAGAACTATTTCCAACTCCCTGATTTGGAAAAGAATCTTCCCGTCAGGATTTCTTCCCCAGGGCTTTCTATTGTAAGTCTTGATGCTGGTAGGAATGATTTGGATAAAAAAAGTGATGAAGAAGATCATGATGATGATTTAGGAGATCTTTGTAGGGAAGTTAGGTGCATTGAATCAGAAGACCAAATTACAAACACACAGACACACTCAAATCCAGCAGATTTAAGTCCAAATTTATACATGGACAACAATGCATCATCTCCGGGGACAAATACAGCCGTCACAGGAGTGACAGAAGTTGATGATAGAGACAAAGAAAATGTAGATTTGTGTTCATCTGGGTTAAAGGAAAACAAAGAAACAAATCGCCTCCAACAAGATTCCGTTCTTCCCTCTCCAGCGAAAGCATCTCCATGGCTCGCAGACAGCAGCGCATCTAGTTCTATGACCTTGAAATTAACCAGAAGCAGAAGTTGTAAAGCAAGTCTCATGAGAGGTTCATCTTCAGATTGGTTTGACCAGGAAGAAATGATTCAGAACACCCCGCCAATAGGAATCGAAAAAGACTTCACTGGAAGACCTGAGAGCTTCCAAAGGAAGAGTTATACTTTAAATTATAATGCCAATGCTGAGAGGATATCATGGGCTGGTTTTGTGAATTCTCTGGGACGTGCTGCTGTTGATGTACAGAATCTCAAATCCTCTACCGATAATGAAAGTAACAGCGAGAGCTCAAATCTACAGACAAAACGTGAGGTTTCAGAGAAAGGATTGGAGTCCGTTAATACTGCAAAGAAGTTCAAAGATGTTGGCTTGGACCCATTGCAATCTGTTGAAGAAAAACAGTTGGAATGGTCTTCAGAATTTAAGCGGCTGCAAAGAGAGATTATTGAACTCTGGAATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTCAAAGGGGACCCGTCAGATTCTATCTATATGGAGGTTGAGCTGAGAAGGCTATCCTTTCTCAAGCAAACCTTTGCCCAGGGAAATCAGACTGTGGAAGACGGACGAGCCCTTACCCCTGAATCAAGCACGAAGTATCTTCGAAGAGAGAGACAGATGTTGAGCAAGCAAATGCAGAGGAAGCTATCAAAATCTGAAAGAGAGAACCTGTATTCGAAGTGGGGTATTAGTGGGAATTCAAGGCATAGGAGGTTGCAATTGGCTCACCGCCTGTGGTCAGAAACAGAAGACACAGAAAGCATTAGAGAGAGTGCCACCATTGTTGCAAAGCTGGTTGGTTCAGTACAGCCAGATCAGGCTTTTAAGGAGATGTTTGGGCTCAACTTTGCCCCACGGCGCACAAGAAAGAAATCTTTTGGTTGGACAGCCAGTATGAGGCATATTTTATGA 2841 0.4256 MGSIAGEEAMQSPTGSHERILVSVRVRPLNEKELARNDLSEWECINDTTIMYRSNLSASEKSLYPTAYTFDRVFRNDCPTRQVYEEAAKEVALSVLCGINSSVFAYGQTSSGKTFTMSGITEYTVADIFNYIDKHKEREFVLKFSAIEIYNESVRDLLSTDSTPLRLLDDPEKGTVVERLTEETLRDWNHFQELISFCENQRQIGETALNEASSRSHQILRLTIESSAREFLGKDSLAASVNFVDLAGSERASQTNSAGARLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFATCAKEVTTNAKVNVVMSDKLLVKQLQKELARLENELRNSGSNRQKSDSEALLREKDLQIKMLKKEVMDLTLQRDLAQSQIKDMLQVVGDDTSSTEVECLDHQYPKLRVRSSWDFESRIPEHPSFDGMESVRSFDASQYSDGHSFSSDENYFQLPDLEKNLPVRISSPGLSIVSLDAGRNDLDKKSDEEDHDDDLGDLCREVRCIESEDQITNTQTHSNPADLSPNLYMDNNASSPGTNTAVTGVTEVDDRDKENVDLCSSGLKENKETNRLQQDSVLPSPAKASPWLADSSASSSMTLKLTRSRSCKASLMRGSSSDWFDQEEMIQNTPPIGIEKDFTGRPESFQRKSYTLNYNANAERISWAGFVNSLGRAAVDVQNLKSSTDNESNSESSNLQTKREVSEKGLESVNTAKKFKDVGLDPLQSVEEKQLEWSSEFKRLQREIIELWNACNVSLVHRTYFFLLFKGDPSDSIYMEVELRRLSFLKQTFAQGNQTVEDGRALTPESSTKYLRRERQMLSKQMQRKLSKSERENLYSKWGISGNSRHRRLQLAHRLWSETEDTESIRESATIVAKLVGSVQPDQAFKEMFGLNFAPRRTRKKSFGWTASMRHIL* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0326 946 Pfam Kinesin motor domain 25 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0326 946 Coils Coil 349 383 - -
Apr3g0326 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 373 IPR027417 -
Apr3g0326 946 Pfam Domain of unknown function (DUF3490) 769 928 IPR021881 -
Apr3g0326 946 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 946 - -
Apr3g0326 946 Coils Coil 386 413 - -
Apr3g0326 946 Coils Coil 756 776 - -
Apr3g0326 946 Gene3D Kinesin motor domain 11 371 IPR036961 -
Apr3g0326 946 MobiDBLite consensus disorder prediction 595 613 - -
Apr3g0326 946 ProSitePatterns Kinesin motor domain signature. 239 250 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr3g0326 946 MobiDBLite consensus disorder prediction 714 729 - -
Apr3g0326 946 CDD KISc_CENP_E 20 340 - -
Apr3g0326 946 ProSiteProfiles Kinesin motor domain profile. 19 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0326 946 MobiDBLite consensus disorder prediction 714 738 - -
Apr3g0326 946 MobiDBLite consensus disorder prediction 595 622 - -
Apr3g0326 946 PANTHER CENTROMERE PROTEIN E 2 946 - -
Apr3g0326 946 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0326 946 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0326 946 PRINTS Kinesin heavy chain signature 240 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0326 946 PRINTS Kinesin heavy chain signature 290 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0326 946 SMART kinesin_4 17 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0326 Apr-Chr3 6502362 6508466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0326 13 370 Miscellaneous Gene Families AT5G06670 43.360 2.34e-82 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0326 K11498 - gmx:100775190 1425.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0326 3 6502362 6508466 Apr7g1082 7 17784880 17793125 ECH
Apr5g1633 5 19967130 19974636 Apr3g0326 3 6502362 6508466 ECH
Apr3g0326 3 6502362 6508466 Apr3g0326 3 6502362 6508466 ECH
Apr5g1807 5 21367668 21374594 Apr3g0326 3 6502362 6508466 ECH
Apr7g1082 7 17784880 17793125 Apr3g0326 3 6502362 6508466 PCT