Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1807 ATGGGAGCTATTGGTGGAGAAGAGCTAGTGAAATGGGAGAAGATGGAAGGAGTGGGTGGCCATGAAGAGAAGATTCTCGTGTTAGTGAGGCTGAGGCCTTTGAGTGAGAGGGAAATTGCTGCGAATGAAGTAGCAGACTGGGAATGTATCAATGACACCACTATCTTATATCGGAACACCCTTCGCGAAGGTTCTTCATTTCCAAGTGCCTACACCTTTGACAGAGTATTTCGGGGTGACAGCACCACAAAACAGGTATATGAGGATGGGGCCAAAGAAATTGCTCTTTCAGTTGTTGGTGGAATTAACTCAAGTATTTTTGCATACGGGCAAACCAGTAGTGGAAAGACATACACGATGATTGGAATAACCGAGTATGCTGTAGCTGATATTTTTGACTATATAAATAAGCATGAAGAAAGAGCATTTGTATTGAAGTTCTCGGCTATTGAAATTTACAACGAAATTATTAGAGACCTACTTAGCTCTGAGAACACTCCACTTAGGCTGCGTGATGATCCTGAGAGAGGACCTATTGTAGAGAAACTGACAGAGGAAACTCTACGAGACTGGGTGCATTTGAAAGAGCTTCTATCATTCTGTGAAGCGCAAAGACAGGTAGGAGAGACATACCTCAATGATAAGAGTTCTCGATCTCATCAAATTATCAGACTGACAATTGAAAGTTCTGCCAGAGAATTCTTGGGTAAAAGCAACTCAACCACCCTTGCAGCTAGTGTGAATTTTGTTGATTTGGCAGGGAGTGAGCGTGCATCTCAGGCATTATCAGCTGGGTCCAGATTGAAAGAAGGTTGTCACATAAACCGGAGTTTACTCACCCTTGGAACAGTCATTCGTAAACTTTGTAAGGGAAAACAAGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTCCTTGGGTGGCAATGCAAGAACAGCCATCATTTGCACTTTAAGCCCTGCGCGGAGCCATGTTGAGCAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCTCTAAAGCGCAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAGCTGCAAAAAGAGGTGGCCAGATTAGAGAGTGAGTTGAGAACTCCTGGTCCTCCTGCCACAAATTGTGATTGTGCAGCAATGTTGAGAAAGAAAAATCTCCAGATAGAAAAGATGGAGCAGGAGATTAGGGAGCTAATTAAGCAATGTGATCTTGCTCAATCTCGGGTCGAGGATTTACTGCACATGGTTGGAAATGTTCAGAAATCTAAAAGGGAAAGGGTGGATACCTGGGAAGATGACGATTCAATATCAGAGTCATCAAGCATTTATCGTCCTGATTCACGCAATAGAGAATTCAACAATCCTCACTATAACAATGAAGACAGTGAAAGTAATCCTGATAAATACCCTTATGAATACTGCAAAGAAGTTCAATGTGTTGAATTAAGTAGAGATGACTCAGAACATCCTGATCCATCAGTAAGTGACAATGGGGTGCTGGCATTGCCCTTACATGCAGAGGAAAATGGAACAAGTCAAGAAACATCAACTCCTATGAATGAAGATAGGGAAGTGATACAGAACCAAGACAATGCAACTTATGGGGATGCACAGTTGAGTATTGATTCTCTTGAATGTTCTTATCCTGAAGAACAATCTAGACAGGCTATGGAACCAACAGTATCAAATATTAGGAATCTTAAATTAACAAGGAGCTGGAGTTGTAGGGAACATTACCTGACTGGTTCTCCTCAGAAAGTGGGAGAAATGGAGAGGACTCCAGCCAGTAGTTTTGAAAAATGCTTCACTGGAAGACCAGGTGGATTGCAGAGAAAGTTCCTCCCATTAACTTATGGTGCTTCCGCAAAATTGTCAACGAATGGTGGTTCTCCGTCTTCTATTGGAAGTCCTTCTGGAGATGAGTTAAGAACCAACAGCATAAGAACATCTACAAATGAGGATGTTACTAGCATCCAAACTTTTGTTGCTGGGATGAAGGAAATGGTCAAACTTGAGTATGAGAAGCAGCTTCTTGATGGTCAGGATCAGCTGGGAGAGACAACGGCTTTTAAATTTGAGAAGAATATGAAGGATGTAGGTGTGGATCCAGTGCTAGAAGCACCTGAATCTCCTGTAGATTGGGCTTCGCAATTCAAGCAGCAGCAAAAAGAGATAGTTGAACTGTGGCAAACTTGCAGTGTATCATTGTTTCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCTACAGACTCCATTTACATGGAGGTGGAGCTTAGAAGACTATATTTCCTCAAAGAAACATTGCTCAATGGATCTTCAAGTGTGAAGGGTCTTGGTCGGGAGAGAGAGATGCTGGTGAAGCTTATGCAGAAAAGTCTATCAGAGGAGGAGAGGCAGAATCTCTTCAAGCAGTGGGGCATTGCATTGGATTCAAAGCGCAGGAGGAAGCAGCTGGTGAAGCGCTTATGGAGCAATACTGATATGAACCATGTCATGGAGAGTGCTTCAGTTGTTTCAAAATTAGTGAGGTTTACAGGGCAGGGTATGGCCCTTAAGGAGATGTTTGGCCTCAGCTTCACTCCCCATCGAATGTCATATTCCCGGAGAAATAGCATCAGCAAGGCCTCTCTTTCTTTCTTGTAA 2682 0.4277 MGAIGGEELVKWEKMEGVGGHEEKILVLVRLRPLSEREIAANEVADWECINDTTILYRNTLREGSSFPSAYTFDRVFRGDSTTKQVYEDGAKEIALSVVGGINSSIFAYGQTSSGKTYTMIGITEYAVADIFDYINKHEERAFVLKFSAIEIYNEIIRDLLSSENTPLRLRDDPERGPIVEKLTEETLRDWVHLKELLSFCEAQRQVGETYLNDKSSRSHQIIRLTIESSAREFLGKSNSTTLAASVNFVDLAGSERASQALSAGSRLKEGCHINRSLLTLGTVIRKLCKGKQGHINYRDSKLTRILQPSLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTSKAQVNVVMSDKALVKQLQKEVARLESELRTPGPPATNCDCAAMLRKKNLQIEKMEQEIRELIKQCDLAQSRVEDLLHMVGNVQKSKRERVDTWEDDDSISESSSIYRPDSRNREFNNPHYNNEDSESNPDKYPYEYCKEVQCVELSRDDSEHPDPSVSDNGVLALPLHAEENGTSQETSTPMNEDREVIQNQDNATYGDAQLSIDSLECSYPEEQSRQAMEPTVSNIRNLKLTRSWSCREHYLTGSPQKVGEMERTPASSFEKCFTGRPGGLQRKFLPLTYGASAKLSTNGGSPSSIGSPSGDELRTNSIRTSTNEDVTSIQTFVAGMKEMVKLEYEKQLLDGQDQLGETTAFKFEKNMKDVGVDPVLEAPESPVDWASQFKQQQKEIVELWQTCSVSLFHRTYFFLLFRGDPTDSIYMEVELRRLYFLKETLLNGSSSVKGLGREREMLVKLMQKSLSEEERQNLFKQWGIALDSKRRRKQLVKRLWSNTDMNHVMESASVVSKLVRFTGQGMALKEMFGLSFTPHRMSYSRRNSISKASLSFL* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1807 893 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 MobiDBLite consensus disorder prediction 432 481 - -
Apr5g1807 893 Pfam Domain of unknown function (DUF3490) 728 874 IPR021881 -
Apr5g1807 893 Coils Coil 355 375 - -
Apr5g1807 893 PANTHER KINESIN-LIKE PROTEIN KIN-7F 7 886 - -
Apr5g1807 893 MobiDBLite consensus disorder prediction 432 450 - -
Apr5g1807 893 CDD KISc_CENP_E 24 346 - -
Apr5g1807 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 378 IPR027417 -
Apr5g1807 893 MobiDBLite consensus disorder prediction 635 660 - -
Apr5g1807 893 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 Gene3D Kinesin motor domain 19 377 IPR036961 -
Apr5g1807 893 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 MobiDBLite consensus disorder prediction 460 481 - -
Apr5g1807 893 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1807 893 Coils Coil 392 419 - -
Apr5g1807 893 PANTHER CENTROMERE PROTEIN E 7 886 - -
Apr5g1807 893 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1807 Apr-Chr5 21367668 21374594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1807 22 376 Miscellaneous Gene Families AT5G06670 42.975 6.55e-80 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1807 K11498 - gmx:100813479 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1807 5 21367668 21374594 Apr5g1807 5 21367668 21374594 ECH
Apr5g1807 5 21367668 21374594 Apr3g0326 3 6502362 6508466 ECH
Apr5g1807 5 21367668 21374594 Apr7g1082 7 17784880 17793125 ECH