Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1633 ATGACTCAGGAAGAGAGAATATTCGTTTCGATCAGAGTAAGGCCTTTGAATGAGAGAGAAAGAGCGAGGCACGATGTGTCCGATTGGGAATGCGTTTCTGGTCACACTCTCAGATTCAAGGGCAACGGCCATGCAGAACAGCGAGCATTGTCTACGGATTCCTACACGTTTGACAGGGTATTCGGGGATAGGTGCAACACAAAGCAGGTTTATGAACAAGGGATTAAGGAAGTTGCCCTTTCAGTAGTTAATGGAATCAACTCTAGCATTTTTGCATACGGGCAAACAAGCAGTGGAAAGACGTATACCATGACTGGAATTACTGAATATGCTGTAAGGGATATATATCAATACATAGAGAAGCGTAAAGACAGAGAATTTGTTGTGAAGTTCTCTGCCATGGAGATTTACAATGAAGCTGTCAGGGACCTTCTCAATGCAGGTGGTACCTCACTAAGACTCCTAGATGATCCAGAGAAAGGGACTTTTGTGGAGAAACTTACGGAGGAGACTCTGAGAGAGAGGAGCCAGTTGCAGCAACTCCTTTCAATATGTGCAGCTGAAAGGACAACGGAAGAGACAGCCATGAATGAAACTAGCTCCAGATCTCACCAAATTCTTCGATTGGTATTTACTTTATCATTAATTGAAAGTAATCCTAGTAATTTTGCTGCAACCGCAAGATCTGGCACGCTCACCGCCAATGTGAATTTTGTTGATCTAGCTGGAAGTGAGCGCGCTTCTCAGGCTTTGTCAGCTGGCACAAGATTGAGAGAAGGAAGCCACATAAATCGCAGTTTACTGACCCTAGGAACTGTAATTCGGAAACTAAGCAAGGGAAGAAATGAACACATACCTTACAGAGACTCTAAGCTTACTCGCATTCTGCATAACTCTTTAGGAGGTAATGCCAGAACAGCGATAATTTGTACCATTAGTCCTGCGCGGAGCCAGATTGAGCAATCAAGAAATACTCTGCTTTTTGCCGGTTGCGCAAAACAGGTGGCTACTAATGCTCGGATCAATCTAGTGATGTCAGACAAAGTTTTGGTAAAGCAACTGCAAAGGGAATTGGCTAGATTGGAGAATGAGTTGAGGAAGTTCACCCCAAATACCGTCTTACTTAAGGAGAGAGAACTTCAAATTGAGCAGATGGATAAAGAGATCAAAGAATTGACTCGGCAACGTGATCAATTTCAATCTCATGTTGAAAATTTTCGTCATTCTGCTGGGAAAGATAGGGTTTCAAGAGTAGATAAAGATTCAGCCTCAGAATCGTCACGTGTTGCCAAAAATCTTCCCAGGATGAATAGCATATCTGAGAATCTTGACACAACGACTAATTTGTCTATTTCACATGAGCACCTTTTACAGCAAACTGAGAATTCTGAAGACTACTTTCTCTTGGATGGAAGTTCTCCCACGTTTGGTGGGCCTGATCCATGTCAAGGTTGGGAGGAGATGGCGAGCAGAGCTGAATCTCAAGATAACTGCGAGGAAGTTAGCAAAGCTGAATCTCAAGATAACTGCGAGGAAGTTAGCAAAGCTGAATCTGAGGATATCTGCAAGGAAGTTAGCAGCGACGAATATGAAGATAACTGCAGGGAAGTTCCATGTATTGAAATAAAAGAAGTGGAAAAAGACCGACAAACAGATCTTAATACCCCTATTCCTGTTTTTGAAGAAAATGGAGGAGTATCACCCACGATGGACATCGATGCTGAATCATCCTTGGGGGGAAATTTACCTACGACACAAGTTGTGGATGTAGATGCTAAATCATTCTCCGGGGAAAATTCACCCATGATAAAAGTTGTGAACGTAGATGCTAGATCATCCTCAGGGAATGGGCAGAATGGACATTGTGAGTCGATTCATGTTGCCGAAAATGATAGCCAAGATAACCTCTCAGAGAAATCCAGTGGGTCTTCTGAATCCGAGCCACACATTTTGGCTCCCATGTCTCTTCCTCAAACAGATGAGGTGGATCAGGAAAATTCAGCACATCCTCAGGTCAGCAAGTTGGAGCAGAATGCATCGCCTTCTCGGTTTAATAAGCTGAACCAGGAACCTGCATCACCTCCTCAGTTCGATGAGCAAGAGCTTAAGACTACTTTGCCTCCTAAACTTGATGAGCAGGAACAGGTATCGGTCACTTTACCAGATGAGGTCGATAGGGAAAATGCCACTAGTTTGGCTTGCTTTCAGGACAACCAACCTGAATCTAAGTTACATGCTACAAAAAGAAAGTCCTCCAGAAAATATTCTGCAGTTCACGATATGAATGCTTCAGTTGAAGACGTAGAATCCGCTTGGGACTCTGATGCGGAGGATACTGCTAGCGTTCTCAATTTTGTTGTGGCAATGAACCAAAAGGCTAAGATAAAGCCATTGAACTGCGACTTGGATGATATTATGGTACGAGCAAGGAAATCAGGGATCAGTAAACGTGTGAACCAAATAAAAGGTATCAGTTTCCATGGAGTTCCGGGGGCTTTGGTGCCTTATGATTTTGAGAGGCAGCAGAGAGATATAATCCAACTTTGGGATGCATGTAATGTGCCGCTGGTGCATAGAACCTATTTTTTTCTTCTCATCAAAGGTGAACTTTCGGATTCTGTGTACTTGGATGTAGAGCTCAGACGTTTGTCTTTCCTTAAGGACACCTTTTTTGGTGGAACTAGCATTACGGGTGATGGTCGGGATGTCACCCCTAATTCAAGCCTGACGTCACTTAATCGTGAGAGGAAAATGCTAAGTAAGCACGTGCATAAGAAGTTTTCGAGGAAGGAAAGAGAGGAACTTTACCAGAAGTGGGGTATTGATTTGAAGTCTAAGCACAGAAGTGTACAATTGGCATGGCTCGTATGGACGAACACAAAAGATCTGACCCACGTAAGGGAAAGTGCAGCACTTGTTGCAAAGCTTGTTGGTTTTATAAACTCGGGTGAGGCCACAAAGAAAACATTTGGATTTGGCTTCTTAACCCGTCGTAAGACCAAGAATGATTCCACTTGGAAGGACACAATGTCTACTGTATTATAG 3045 0.4328 MTQEERIFVSIRVRPLNERERARHDVSDWECVSGHTLRFKGNGHAEQRALSTDSYTFDRVFGDRCNTKQVYEQGIKEVALSVVNGINSSIFAYGQTSSGKTYTMTGITEYAVRDIYQYIEKRKDREFVVKFSAMEIYNEAVRDLLNAGGTSLRLLDDPEKGTFVEKLTEETLRERSQLQQLLSICAAERTTEETAMNETSSRSHQILRLVFTLSLIESNPSNFAATARSGTLTANVNFVDLAGSERASQALSAGTRLREGSHINRSLLTLGTVIRKLSKGRNEHIPYRDSKLTRILHNSLGGNARTAIICTISPARSQIEQSRNTLLFAGCAKQVATNARINLVMSDKVLVKQLQRELARLENELRKFTPNTVLLKERELQIEQMDKEIKELTRQRDQFQSHVENFRHSAGKDRVSRVDKDSASESSRVAKNLPRMNSISENLDTTTNLSISHEHLLQQTENSEDYFLLDGSSPTFGGPDPCQGWEEMASRAESQDNCEEVSKAESQDNCEEVSKAESEDICKEVSSDEYEDNCREVPCIEIKEVEKDRQTDLNTPIPVFEENGGVSPTMDIDAESSLGGNLPTTQVVDVDAKSFSGENSPMIKVVNVDARSSSGNGQNGHCESIHVAENDSQDNLSEKSSGSSESEPHILAPMSLPQTDEVDQENSAHPQVSKLEQNASPSRFNKLNQEPASPPQFDEQELKTTLPPKLDEQEQVSVTLPDEVDRENATSLACFQDNQPESKLHATKRKSSRKYSAVHDMNASVEDVESAWDSDAEDTASVLNFVVAMNQKAKIKPLNCDLDDIMVRARKSGISKRVNQIKGISFHGVPGALVPYDFERQQRDIIQLWDACNVPLVHRTYFFLLIKGELSDSVYLDVELRRLSFLKDTFFGGTSITGDGRDVTPNSSLTSLNRERKMLSKHVHKKFSRKEREELYQKWGIDLKSKHRSVQLAWLVWTNTKDLTHVRESAALVAKLVGFINSGEATKKTFGFGFLTRRKTKNDSTWKDTMSTVL* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1633 1014 CDD KISc_CENP_E 7 335 - -
Apr5g1633 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 368 IPR027417 -
Apr5g1633 1014 MobiDBLite consensus disorder prediction 555 699 - -
Apr5g1633 1014 PANTHER CENTROMERE PROTEIN E 2 1012 - -
Apr5g1633 1014 MobiDBLite consensus disorder prediction 578 593 - -
Apr5g1633 1014 MobiDBLite consensus disorder prediction 606 648 - -
Apr5g1633 1014 Pfam Kinesin motor domain 12 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1633 1014 Gene3D Kinesin motor domain 1 366 IPR036961 -
Apr5g1633 1014 MobiDBLite consensus disorder prediction 659 699 - -
Apr5g1633 1014 SMART kinesin_4 4 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1633 1014 Coils Coil 344 371 - -
Apr5g1633 1014 Pfam Domain of unknown function (DUF3490) 837 996 IPR021881 -
Apr5g1633 1014 Coils Coil 375 409 - -
Apr5g1633 1014 PANTHER KINESIN-LIKE PROTEIN KIN-7J 2 1012 - -
Apr5g1633 1014 MobiDBLite consensus disorder prediction 406 429 - -
Apr5g1633 1014 ProSiteProfiles Kinesin motor domain profile. 6 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1633 1014 MobiDBLite consensus disorder prediction 406 426 - -
Apr5g1633 1014 PRINTS Kinesin heavy chain signature 85 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1633 1014 PRINTS Kinesin heavy chain signature 194 211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1633 1014 PRINTS Kinesin heavy chain signature 235 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1633 1014 PRINTS Kinesin heavy chain signature 285 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1633 Apr-Chr5 19967130 19974636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1633 1 368 Miscellaneous Gene Families AT5G06670 40.000 7.36e-75 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1633 K11498 - gmx:100802097 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1633 5 19967130 19974636 Apr3g0326 3 6502362 6508466 ECH
Apr5g1633 5 19967130 19974636 Apr7g1082 7 17784880 17793125 ECH
Apr5g1633 5 19967130 19974636 Apr5g1633 5 19967130 19974636 ECH