Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1548 ATGGAGAGAGAATATCAGCATGAACCTCTACGGTCTCCCTTGATTCAAATCACAGGTCAAGAACAAGATGAAGTCAAAGTTGATAATGATACACTGAAAAACAATAAAAGTATAGCAGTAAGAAGAGAAATTTTTGAAGAAGTGGAGAAGCAGTTATGGCTGGCAGGGCCTTTGATATCTGTGGGTCTGCTAAACTTTTGCATACAGATTATATCCGTAATGTTTGTTGGTCACCTAGGCGAGTTGCCACTCTCTGGTGCTTCAATGGCTACTTCTTTTTGTTCTGTCACTGGTGTTAGCTTACTGCTGGGAATGGCATGTGCCTTGGATACCTTGTGTGGCCAGTCATATGGAGCTAAGCAACACCGCATGTTAGGCATACACACTCAGAGGGCCATGCTACTTCTTATGATTGTAAGCATACCCCTTGCAATTATTTGGGCAAACACAAGAACCATTTTGATTTTCCTTGGCCAAGATCCTGAGATATCTGAAGAAGCTGGAAAATATGCTCAATTAATGATTCCAAGCCTTTTTGCTTATGGTCTTATTCAGTGCCTAAACAGATTCTTGCAAACCCAAAACATTGTATTTCCAATGGTATTTAGCTCTGCAGTTACTACATTACTACATCTTCTTGTTTGTTGGCTTATGGTATTCAAATATGGACTAGGAAGCAGAGGAGCTGCTATAGCAAATTCTACATCTTATTGGGTGAATGTTTTGATACTAACACTCTATGTCAAGTTTTCTCCTTCGTGTGCAGCAACTTGGACAGGCTTTTCAAAAGAGGCACTGCATAACATTCCCTCTTTTCTAAGGCTTGCCATTCCTTCAGCTGTAATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTATCTGGTCTTCTACCAAATCCAAAGTTAGAAACATCAGTGCTTTCTATTTGCTTAAATACAGCATCAACTGTTTGGATGATCCCCTCTGGTTTCAGTGAAGCTATCAGCATTCGTGTGTCAAATGAGCTTGGAGCTGGTCATCCATGGGCTGCACGTTTAGCTGTGTTTGTTGTTGTGGTAATGACAGTTATTGAAGGCATTTTAGTTGGAACCGTGATGATACTAATGCGGAATATTTGGGGCTATGTATATAGTAATGAAGTAGAAGTGGTCAAATATGTAGCAATTATGATGCCACTTCTTGCAGCATCCAATTTTCTAGATGGGATCCAGGGTGTACTTTCAGGCACAGCTAGAGGTTGTGGTTGGCAGAAAATTGGTGCCTTTATCAATCTAGGCTCTTATTATCTATGTGGGATTCCATCAGCAATTCTGTTTACTTTTGTATTGTATATTGGAGGGAAGGGGCTATGGCTAGGAATCATATGTGAACTTATTGTTCAAGTATTATCTCTATTGGTCATCACTCTACGTACTGATTGGGAGCAAGAGGCAAAGAACGCCGCAGACAGAGTTTTTGATTCAATAACTTCAGAAAACATAGTCTTCTAA 1500 0.4013 MEREYQHEPLRSPLIQITGQEQDEVKVDNDTLKNNKSIAVRREIFEEVEKQLWLAGPLISVGLLNFCIQIISVMFVGHLGELPLSGASMATSFCSVTGVSLLLGMACALDTLCGQSYGAKQHRMLGIHTQRAMLLLMIVSIPLAIIWANTRTILIFLGQDPEISEEAGKYAQLMIPSLFAYGLIQCLNRFLQTQNIVFPMVFSSAVTTLLHLLVCWLMVFKYGLGSRGAAIANSTSYWVNVLILTLYVKFSPSCAATWTGFSKEALHNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTASTVWMIPSGFSEAISIRVSNELGAGHPWAARLAVFVVVVMTVIEGILVGTVMILMRNIWGYVYSNEVEVVKYVAIMMPLLAASNFLDGIQGVLSGTARGCGWQKIGAFINLGSYYLCGIPSAILFTFVLYIGGKGLWLGIICELIVQVLSLLVITLRTDWEQEAKNAADRVFDSITSENIVF* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1548 499 PANTHER PROTEIN DETOXIFICATION 27 487 - -
Apr2g1548 499 TIGRFAM matE: MATE efflux family protein 57 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr2g1548 499 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Apr2g1548 499 Pfam MatE 278 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr2g1548 499 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr2g1548 499 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1548 Apr-Chr2 21369538 21372638 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1548 K03327 - gmx:100792588 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1013 6 14830039 14834921 Apr2g1548 2 21369538 21372638 ECH
Apr4g2721 4 35805143 35810055 Apr2g1548 2 21369538 21372638 ECH
Apr6g0405 6 4631522 4637069 Apr2g1548 2 21369538 21372638 ECH
Apr2g1548 2 21369538 21372638 Apr2g1548 2 21369538 21372638 ECH