Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2721 ATGGAAGAAGGTTTGGATAGTGGAAAATGGGGATGGATGAAAACAAGAAGAGCAATAAAGGGAGAGCTGAAGAAGGTGGGAACCATAGCGGCACCAATGGTGGTGGCAACTGTGCTGCAATATCTTCTACAAGTGGTGTCCATGATAATGGTTGGCCATCTTAACCAGCTTGCGCTTTCAAGTGTTGCTATTGCAACATCTCTCACCAATGTTTCTGGGTTTAGTGTTTTGTCAGGGATGGCTGGTGGATTGGAAACTTTATGTGGCCAAGCATTTGGAGCAGAACAATATGAAAAATTTGGACTATATACCTACACTGCCGTAATATCCCTCACTTTGGTTTCTATCCCTATCACAGTTCTATGGATTTTCATGGACAAAATGTTAATTCTCTTAGGTCAAGACCCAACAATATCCCTTGAAGCTCGCAAATATGCCATTTGGCTAATACCTGCTTTATTTGGTTCAGCAATTCTTAAACCTTTAACAAGATTTTTCCAGACTCAGAGTTTGATTTTTCCCATGATCCTAAGCTCCACTTTAGTTTTGTGCTTCCACGTAGTAACTTGTTGGACCTTAGTATTTAAATTGAAATTAGGACTCGTTGGTGCTGCAATTGCCTTCAGCTTTTGCGTTTGGTTGAATTTGATACTGCTTTTGTCCTTTGTGAGGTATTCATCTGCTTGTGAGAAAACACGTATCCCATTTTCAAAGAAGGCTTTACTTGGTGTAGGAGAGTTCTATCGCTTTGCAGTCCCATCAGCTGTCATGATTTGTCTTAAATGGTGGGCATGCGAGTTGCTTGTTTTGCTTGCTGGACTTTTCCCAAATCCAAAGCTGGAGACATCAGTTCTCTCTATATGCTTGACAATTTCTACATTACACTTCACCATACCCTATGGCTTTGGGGCTGCAGCCAGCACTAGAGTTTCCAATGAATTAGGAGCTGGGAATCCACAAGCTGTTCGAGTGGCTGTTTCTGCAGCAATGTTCCTTGCAGTTACTGAGGGTCTCATTGTAAGTGCAACACTATTCGGGTGCAGACATATCTTGGGTTATGCCTACAGCAACGACACTATGGTTGTTCATTACGTGTCTGTTATGACCCCTCTCCTATGTCTCTCCATTTTTACTGACAGCTTGCAAGCAGTTCTTTCAGGGGTTGCTAGAGGAAGTGGGTGGCAACATCTTGGAGCCTATGTCAATCTTGGAGCTTTTTATTTGGTAGGAGTTCCTGTGGGTGTCCTACTTGGCTTTCTTGAACATTTCAGAGCAAAGGGTCTTTGGATCGGAATAGTCACAGGCTCCATTGTCCAAACCATTTTCCTTTCCCTCATTACTGCTCTTACAAATTGGAAAAAACAGGCAATGATGGCAAGGGAGAGAATATTTGATGCTAAACCTTCTGATGAAAATGGATCAAATCACATGGCGAGTGCTTAA 1443 0.4234 MEEGLDSGKWGWMKTRRAIKGELKKVGTIAAPMVVATVLQYLLQVVSMIMVGHLNQLALSSVAIATSLTNVSGFSVLSGMAGGLETLCGQAFGAEQYEKFGLYTYTAVISLTLVSIPITVLWIFMDKMLILLGQDPTISLEARKYAIWLIPALFGSAILKPLTRFFQTQSLIFPMILSSTLVLCFHVVTCWTLVFKLKLGLVGAAIAFSFCVWLNLILLLSFVRYSSACEKTRIPFSKKALLGVGEFYRFAVPSAVMICLKWWACELLVLLAGLFPNPKLETSVLSICLTISTLHFTIPYGFGAAASTRVSNELGAGNPQAVRVAVSAAMFLAVTEGLIVSATLFGCRHILGYAYSNDTMVVHYVSVMTPLLCLSIFTDSLQAVLSGVARGSGWQHLGAYVNLGAFYLVGVPVGVLLGFLEHFRAKGLWIGIVTGSIVQTIFLSLITALTNWKKQAMMARERIFDAKPSDENGSNHMASA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2721 480 Pfam MatE 253 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g2721 480 Pfam MatE 32 192 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g2721 480 CDD MATE_eukaryotic 22 456 IPR045069 GO:0042910|GO:1990961
Apr4g2721 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 459 - -
Apr4g2721 480 TIGRFAM matE: MATE efflux family protein 32 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr4g2721 480 PANTHER PROTEIN DETOXIFICATION 12 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2721 Apr-Chr4 35805143 35810055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2721 K03327 - gmx:100808206 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2721 4 35805143 35810055 Apr6g1013 6 14830039 14834921 ECH
Apr4g2721 4 35805143 35810055 Apr2g1548 2 21369538 21372638 ECH
Apr4g2721 4 35805143 35810055 Apr4g2721 4 35805143 35810055 ECH