Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0405 ATGCTTCGTAGAAACATCCGTTTGAGGAGAGAGTATTTGTACCGAAAGAGCTTAGAAGGCCATAAGCGCTTGCACTACGAGAAGAAGCGACAGATCAAAGAAGCTCTTCAAGAAGGGAAATCCATACCCACTGAGCTCAGGAACGAGGAAGCGGCACTTCGTCGTGAAATCGATCTCGAGGATGAATACACAGCTGTTCCAAGGACACACATTGATGATGAGTATGCTAATGCTGCGGAGAAAGATCCAAAAATTTTGCTGACCACATCACGTGATCCAAGTGCTCCTCTTCAACAGTTTGTAAAGGAGTTGAGTATTGTCTTTCCTAATGCACAAAGAATGAATCGCGGTGGTCAGGTTATCTCAGAGATTATAGAGTCTTGTCGTGCACATGACTACACAGATGTTGTTTTAGTTCATGAACATCGTGGTGTCCCTGATGGTTTAATTGTTTGTCATCTACCATTTGGTCCAACTGCATATTTTGGATTACTCAACGTGGTTACAAGGCATGAAATTAAAGACAAGAGAGCCATTGGAACAATGCCTGAGGCTTATCCGCATCTAATTCTTGATAATTTCTCAACTAAGTTAGGTGAAAGGACAGCAAACATTCTAAAGCATCTTTTTCCGGTGCCAAAACCAGACACAAAACGTATTGTCACTTTTTCCAACCAGTCCGACTATATCTCATTCAGGCATCATATTTTTGAAAAGCCAGGCGGCCCCAAATCTGTAGAACTGAAGGAAATTGGTCCACGGTTTGAGTTGCGACTTTATCAGATAAAGTTGGGAACGGTGGATCAAACTGAAGCTCAAATAGAATGGGTGATTAGACCTTACATGAACACAAGTAGAAAGAGGAAATTTCTCGGTAATTAA 882 0.4172 MLRRNIRLRREYLYRKSLEGHKRLHYEKKRQIKEALQEGKSIPTELRNEEAALRREIDLEDEYTAVPRTHIDDEYANAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIKDKRAIGTMPEAYPHLILDNFSTKLGERTANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIFEKPGGPKSVELKEIGPRFELRLYQIKLGTVDQTEAQIEWVIRPYMNTSRKRKFLGN* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0405 293 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 1 290 IPR044281 GO:0006364|GO:0042134
Apr6g0405 293 SUPERFAMILY Class II aaRS ABD-related 82 265 - -
Apr6g0405 293 SMART Brix_2 86 262 IPR007109 GO:0006364|GO:0019843
Apr6g0405 293 Gene3D - 83 258 - -
Apr6g0405 293 ProSiteProfiles Brix domain profile. 83 268 IPR007109 GO:0006364|GO:0019843
Apr6g0405 293 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 1 290 - -
Apr6g0405 293 Pfam Brix domain 90 260 IPR007109 GO:0006364|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0405 K14561 - gmx:100803810 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0405 6 4631522 4637069 Apr6g1013 6 14830039 14834921 ECH
Apr6g0405 6 4631522 4637069 Apr2g1548 2 21369538 21372638 ECH
Apr6g0405 6 4631522 4637069 Apr6g0405 6 4631522 4637069 ECH