Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0293 ATGGGATCACAAACAAGAGTGTGTCCATTTCCTGTAATTGATTTGAGCGATGAAAAGATGAAGGCAGGCACGGAGGCATGGGTGTCGGCGTGCCGTGTGGCGAGGACAGGGATGGAGGAGCACGGTTGTTTTGTGGTGCGGTTCGATAAGGTTGGGGAGTCGCTATGCAAGTGTCTTGTGTCAGCAATGGAGGAACTATTCGGTCTGCCAGTGGAAACAAAAGCACAGAAGACGAGTGACAAGCTTTTTCATGGTTACTTGGGACAAGTCTCCTGGATTCCCTTGTATGAATCTTTGGGCATTGATGACCCTTTCTCTATGCCTGCTTGCCAACACTTTGCAAACATAATGTGGCCTCAAGGCAATAACCGTTTCTGTGAAAGGATTAATGAGTATGCAAAGCTAATGGGGGAAATAGACCATATAGCAAAGAGGATGGTGTTTGAAAGCTACGGAGTGGACATGGAAAGATGCAAATTGATGATAGAATCAAGCGACTATCTGCTTCGATGCCAAGAATATAGGCCACCCAAGAACGATGAGGATGAAACAGGATTGCAGCCTCACACAGACTTAACCATCACATCAATAGTTCACCAACTCAACAATCTCAATGGCTTAGAAATCAAAGCCAGCGATGGAATCTGGAGAGGTGTTGATGCTTCTCCTTCTTCCTTTGTTGTCATGGCTGGTGATGCATTCAAGGTTTGGAGCAATGGTAGGATAAGGCCATGCGAACACAGAGTTACAGTGAGTAGTCATGTCAAGAATCTAAGATACTCTACGGGGCTCTTTTCTTTCTGCTCCAACACATTCGAGATTCCTCAGGAGTTGGTCAATCAACAACATCCCTTGCGTTACAAAACAACCTTCCACCATTATGATTATCTTCACTTCTTTGATGAAAGCAAGATCAAAGATCTTGATACTCGGATTCAAGCCTATTGTGGAATCTCATCCAATCATGAATGA 972 0.4455 MGSQTRVCPFPVIDLSDEKMKAGTEAWVSACRVARTGMEEHGCFVVRFDKVGESLCKCLVSAMEELFGLPVETKAQKTSDKLFHGYLGQVSWIPLYESLGIDDPFSMPACQHFANIMWPQGNNRFCERINEYAKLMGEIDHIAKRMVFESYGVDMERCKLMIESSDYLLRCQEYRPPKNDEDETGLQPHTDLTITSIVHQLNNLNGLEIKASDGIWRGVDASPSSFVVMAGDAFKVWSNGRIRPCEHRVTVSSHVKNLRYSTGLFSFCSNTFEIPQELVNQQHPLRYKTTFHHYDYLHFFDESKIKDLDTRIQAYCGISSNHE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0293 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 86 IPR026992 -
Amo16g0293 323 Pfam 2OG-Fe(II) oxygenase superfamily 172 265 IPR044861 -
Amo16g0293 323 Gene3D - 9 321 IPR027443 -
Amo16g0293 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 269 IPR005123 -
Amo16g0293 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 317 - -
Amo16g0293 323 SUPERFAMILY Clavaminate synthase-like 6 300 - -
Amo16g0293 323 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0293 Amo-Chr16 4431274 4434349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0293 131 299 Glycosyltransferase AT5G59530 25.434 6.35e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0293 - - gmx:100775440 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0293 16 4431274 4434349 Amo12g1648 12 76754378 76756854 PCT
Amo16g0293 16 4431274 4434349 Amo02g1787 02 56037826 56041339 PCT
Amo02g1788 02 56087687 56090219 Amo16g0293 16 4431274 4434349 PCT