Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1788 ATGGGTTCCGAAGAAAAAATCAAGCTTCCAATTCTAAACTTCACCAAAGAAGATCTGAAGCTGGGAAGCAATTCCTGGTCATTTGCATGCGAGAGGGTGCGCAAAGCACTCGAAGAACATGGCTGCTTTGTAGTTGTGTTTGATAAAGTTTCTGACGAGCTTGAAAATGGTGTTTTCAATTCCATGAAGGAACTGTTTGATCTCCCAACAGAAACAAAAATGAGAAACAACTATGAGGGGATGCCCTTGAAAGGCTACGTTGGACAGATCCCCAAGATTCCTCTCCATGAAAGCATGGGCATAGATGAGGGAACAACGCTTCACAAGATTCAAGGCTTTGCTCAAAAACTGTGGCCTAATGGAAATCATCATTTCTGTAAGAATTTGTTTGAGTATGCAAAGATAGCAGAAGAATTGGATCGAATGGTAGCAAGAATGATATTTGAAAGTTATGGTCTAATGGAGGAGCATTATGAAGCATACATGGGGTCCACAAGTTATCTCCTAAGGTTGTTGGCACACAAATCACCAAAAGAGGTTATTGATGAGCCTCAACTGGGTTTGGTGTGTCACACTGACAAGAGCTTCACAACAATTCTTCACCAAAACCATGTCAATGGACTCATGGTGGAGACAAAAGATGGGAATTGGATCCATGTTGATTTTTCTTCTACTAATTCCTTTGTGGTCATGGCTGGCGATGGTTTAATGGCATGGAGCAATGAGAGAATCAAGTCACCGAACCATAAAGTTGTGATGAATTATAATAACAAGAATGAAACGAGGTACTCTCTTGGTTTGTTTGCCTTTTACAAAGGGATTCTTCAAGCACCTGAAAAGCTTATAGATGAAGAGCACCCTTTGAAGTATAAGCCATTTGATCATCTTGCATTACTGAACTTCAGTTACAGCGTTAACATTAAAGACTATTGTGGCATGTAA 942 0.4023 MGSEEKIKLPILNFTKEDLKLGSNSWSFACERVRKALEEHGCFVVVFDKVSDELENGVFNSMKELFDLPTETKMRNNYEGMPLKGYVGQIPKIPLHESMGIDEGTTLHKIQGFAQKLWPNGNHHFCKNLFEYAKIAEELDRMVARMIFESYGLMEEHYEAYMGSTSYLLRLLAHKSPKEVIDEPQLGLVCHTDKSFTTILHQNHVNGLMVETKDGNWIHVDFSSTNSFVVMAGDGLMAWSNERIKSPNHKVVMNYNNKNETRYSLGLFAFYKGILQAPEKLIDEEHPLKYKPFDHLALLNFSYSVNIKDYCGM* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1788 313 Pfam 2OG-Fe(II) oxygenase superfamily 178 268 IPR044861 -
Amo02g1788 313 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 271 IPR005123 -
Amo02g1788 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 312 - -
Amo02g1788 313 SUPERFAMILY Clavaminate synthase-like 7 307 - -
Amo02g1788 313 Gene3D - 7 311 IPR027443 -
Amo02g1788 313 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 87 IPR026992 -
Amo02g1788 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1788 Amo-Chr2 56087687 56090219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1788 126 291 Glycosyltransferase AT5G59530 29.480 3.11e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1788 - - aip:107625404 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo02g1788 02 56087687 56090219 Amo16g0293 16 4431274 4434349 PCT