Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1787 ATGGGATCCCAAACAGAAACCCATGATCTTCCTATTGTTGACTTAACCGATGAAACGCTGAAGCCTGGAACTGAAGCGTGGGTTTCAGCATGTAAAGTAGTTCGAACTGCGTTGGAGGATCATGGTTGTTTCATTGCACGTTACAACAAAATTGGTGAAGAGCTTTGTGATTCTGTTGTCTCTGCATTGGAACAACTATTTGGTCTGCCATTGGAGACAAAGAAGCAAGAGACTAGTGAGAAATTGTTTCATAATTATTATGGACAAATTCCATCTCTTCCATTATATGAATCACTTGGGATTGATGATCCATTAAACATTAAGGGATGCCAGAAGTTCACAAACATCATGTGGCCACAAGGGAATGATCGTTTTTGCGAAAGCGTGAATGAGTATGCAAAGGTATTGGGAGAAGTAGACAAAGTGACAAAGAAGATGGTATTTGAGAGCTATGGTGTGGACAGTGAGCGATGCAATTCATTCATAGAATCAGGAAATTACCTTCTTCGGTGCCTCAAATACAGACCACCAGAGAAGAATGAAACTCATTTGGGAATGCAATCTCACACTGATTTGACTATGCAATCAGTATTGCATCAGCTGAATGGTGTGGCAGGTTTGGAAATCAAAATCAAGAATGGGAACTGGCTGCTTGTTCATCCCTCCCCTTCCTTCTTTCTCGTCATGGCTGGAGATGCTTTCAAGGTTTGGAGCAATGGCAGGATACGTCCGTGTGAACATCGAGTGATAATGAATAACGCAAAGGAAATTAGGTATTCTATGGGGCTTTTCACTTTTAATGGTGACATTGTGCAAATGCCAGAAGAGTTTGTTGATGACAAAAATCCTTTGCGCTATAAACCATTATTTGACCATTTTGATTACCTTCGTTTCTTTGATAAAGAGAAGATCATAGACTCTGATTTGCGAGTCAAGGCATACTTTGGAGTATGA 954 0.4046 MGSQTETHDLPIVDLTDETLKPGTEAWVSACKVVRTALEDHGCFIARYNKIGEELCDSVVSALEQLFGLPLETKKQETSEKLFHNYYGQIPSLPLYESLGIDDPLNIKGCQKFTNIMWPQGNDRFCESVNEYAKVLGEVDKVTKKMVFESYGVDSERCNSFIESGNYLLRCLKYRPPEKNETHLGMQSHTDLTMQSVLHQLNGVAGLEIKIKNGNWLLVHPSPSFFLVMAGDAFKVWSNGRIRPCEHRVIMNNAKEIRYSMGLFTFNGDIVQMPEEFVDDKNPLRYKPLFDHFDYLRFFDKEKIIDSDLRVKAYFGV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1787 317 Pfam 2OG-Fe(II) oxygenase superfamily 172 266 IPR044861 -
Amo02g1787 317 Gene3D - 2 303 IPR027443 -
Amo02g1787 317 SUPERFAMILY Clavaminate synthase-like 4 301 - -
Amo02g1787 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 268 IPR005123 -
Amo02g1787 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 86 IPR026992 -
Amo02g1787 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 316 - -
Amo02g1787 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 3 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1787 Amo-Chr2 56037826 56041339 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1787 127 287 Glycosyltransferase AT5G59530 27.108 1.11e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1787 - - gmx:100791791 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1648 12 76754378 76756854 Amo02g1787 02 56037826 56041339 hybridization
Amo16g0293 16 4431274 4434349 Amo02g1787 02 56037826 56041339 PCT