Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2654 ATGATGAGACAGAAACAAGGAGAGGAAGCAATAGTGAGCAACATGAGCGAAGTAGAGAATGAAGAACAGAATAATGATCAAGAAGAAAACCATTCCATGTTCAGTGTTAAGAGCTTCCTTTGGCATGGTGGCTCTGTTTGGGATGCATGGTTCAGCTGTGCCTCTAACCAGGTGGCTCAAGTGCTGTTGACACTGCCATATTCATTCTCGCAATTGGGGATGGTATCAGGAATAGTGCTTCAGGTGTTCTACGGCATCATGGGAAGTTGGACTGCATATCTCATTAGTGTCCTTTATGTCGAATATCGCTCCAGAAAGGAAAAGGAAAACGTTAATTTCAAGAACCATGTCATTCAGTGGTTCGAAGTTCTTGATGGGTTGCTAGGCAAATATTGGAAAGCATTGGGGTTAGCCTTCAATTGTACTTTCCTCCTCTTTGGATCAGTGATACAGCTTATAGCATGTGCAAGTAACATATACTACATAAATGACAAACTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCTACCACTGTCTTCATTCCTTCTTTCCATAATTACCGTATTTGGTCTTTTCTTGGACTTGGAATGACCACTTACACTGCTTGGTATTTAGCTATTGCTGCTCTTGTTCATGGCCAGGTAGAAAATGTGACACATTCAGGTCCAACGAAGCTAGTACTATACTTCACCGGAGCCACCAACATACTCTACACCTTTGGTGGACATGCAGTTACTGTAGAGATTATGCATGCGATGTGGAAGCCACAGAAGTTCAAGTACATATACTTGTTGGCTACATTGTATGTTTTCACATTAACGATTCCTTCAGCTGCTGCTGTTTATTGGGCTTTTGGTGATGAGCTTCTTAACCATTCCAATGCTTTCTCTCTCCTCCCAAAGAATGCTTTTCGTGATTCAGCTGTTATTCTCATGCTTATTCACCAGTTCATAACATTTGGATTTGCATGTACTCCATTGTACTTTGTGTGGGAGAAAGTAATTGGGATGCATGACACAAAGAGCATTTGTATGAGAGCACTAGCAAGGTTACCGGTGGTGATACCAATATGGTTCTTAGCCATAATATTCCCTTTCTTTGGTCCCATCAACTCTGCTGTTGGTGCTCTTCTTGTTAGCTTCACTGTCTACATCATCCCTTCCTTGGCTCATATGCTTACTTATAGAAAATCCTCTGCAAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACAGCAATGTATGTGATCAATGCATTTGTTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGATTCGGAGGATGGGCCAGCATGACCAATTTCATCAAGCAAATTGACACGTTTGGGCTTTTCGCAAAGTGCTATCAGTGCAAGCCCCCGGTGGCCGCAGCCGCACCTCCGCCTCATTCTCATCCTCCTAGTCTTCATCATTGA 1458 0.4314 MMRQKQGEEAIVSNMSEVENEEQNNDQEENHSMFSVKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVLQVFYGIMGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFEVLDGLLGKYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALVHGQVENVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNAFRDSAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICMRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKSSARQNAAEKPPFFMPSWTAMYVINAFVVVWVLVVGFGFGGWASMTNFIKQIDTFGLFAKCYQCKPPVAAAAPPPHSHPPSLHH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2654 485 PANTHER AUXIN INFLUX TRANSPORTER 3 469 - -
Amo14g2654 485 PANTHER OS05G0424000 PROTEIN-RELATED 3 469 - -
Amo14g2654 485 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2654 Amo-Chr14 113898573 113909068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2654 4 465 Organic Solute Cotransporters AT2G21050 78.788 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2654 K13946 - tcc:18597575 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2654 14 113898573 113909068 Amo14g2654 14 113898573 113909068 ECH
Amo14g2654 14 113898573 113909068 Amo04g1608 04 76472211 76479709 hybridization
Amo14g2654 14 113898573 113909068 Amo12g2089 12 97560813 97566959 PCT
Amo14g2654 14 113898573 113909068 Amo02g2482 02 78488961 78498224 PCT
Amo12g2089 12 97560813 97566959 Amo14g2654 14 113898573 113909068 PCT
Amo02g2482 02 78488961 78498224 Amo14g2654 14 113898573 113909068 PCT