Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2482 ATGTTGTCTCAGAAACAAGCAGAGGAAGCAATAGTAGCCACCACCAACAGCTTCAACGAAACAGAACATGAAGGTGGAGGTGGTGGTGGTGGTGGTGGTGTCAATGGTGGAACAACAAGGGAAGGAGAAGAGAGAGAACAAGATCACTCTATGTTCAGTGTTAAGAGCTTCCTTTGGCATGGTGGTTCTGTTTGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTATTGACTCTGCCATATTCTTTCTCTCAATTGGGAATGCTCTCTGGGATTTTGYTTCAAATATTTTATGGCATAGTTGGAAGTTGGACTGCATATCTAATTAGTGTACTCTATGTTGAGTATAGAACCAGAAAAGAAAAGGAAAATGTTAGCTTCAAGAACCATGTCATTCAGTGGTTTGAAGTGCTTGATGGGTTATTGGGTCCATATTGGAAAGCAGCGGGTTTAGCCTTCAATTGTACTTTCCTCCTCTTTGGATCTGTGATACAGCTTATAGCATGTGCAAGTAACATATACTACATAAATGACAAATTGGACAAGCGAACTTGGACTTACATATTTGGAGCTTGTTGTGCAACCACCGTGTTCATACCTTCGTTCCACAATTATCGTATATGGTCATTTCTGGGTCTTGGAATGACTACTTACACTGCTTGGTACTTAGCCATAGCAGCACTCATTCATGGCCAGGCAGAAAATGTGACGCACTCAGGTCCAACAAAGCTAGTGCTTTACTTCACCGGAGCCACTAACATACTATACACGTTTGGTGGACATGCTGTTACTGTAGAGATTATGCATGCCATGTGGAAGCCTCAAAAGTTCAAGTATATATACTTGTTGGCCACTCTCTACGTTTACACACTAACGCTTCCTTCTGCTGCCGCCGTTTATTGGGCGTTTGGTGATCAGCTTCTTAACCATTCTAATGCTTTCTCTTTGCTCCCCAAAAACCGTTTCCGTGACGCCGCCGTTATCCTTATGCTCATCCACCAGTTCATAACGTTCGGATTCGCGTGCACGCCGCTGTATTTCGTGTGGGAGAAGGTGATCGGAATGCACGACACAAGGAGCATATGTCTAAGGGCACTAGCGAGGCTGCCAGTGGTTATACCGATATGGTTCTTGGCAATAATCTTCCCATTTTTTGGGCCCATAAACTCAGCAGTTGGGGCACTGCTTGTTAGCTTCACTGTCTACATCATCCCCTCCTTAGCTCATATGCTTACTTACAGAAAAGCCTCCGCCAGACAGAATGCTGCAGAGAAGCCCCCTTTCTTCATGCCAAGTTGGACAGCAATGTATGTATTCAATGCATTCATTTTTTTTTTGGTTTCCCACGGTATCCCCCAACCCGGCAGGTCAAGGACTAATCCGTCGCGGTACTGA 1407 0.4471 MLSQKQAEEAIVATTNSFNETEHEGGGGGGGGGVNGGTTREGEEREQDHSMFSVKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILXQIFYGIVGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALIHGQAENVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVYTLTLPSAAAVYWAFGDQLLNHSNAFSLLPKNRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFMPSWTAMYVFNAFIFFLVSHGIPQPGRSRTNPSRY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2482 468 PANTHER OS05G0424000 PROTEIN-RELATED 3 450 - -
Amo02g2482 468 Pfam Transmembrane amino acid transporter protein 60 449 IPR013057 -
Amo02g2482 468 MobiDBLite consensus disorder prediction 13 46 - -
Amo02g2482 468 PANTHER AUXIN INFLUX TRANSPORTER 3 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2482 Amo-Chr2 78488961 78498224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2482 5 425 Organic Solute Cotransporters AT2G38120 84.561 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2482 K13946 - gmx:100778463 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2089 12 97560813 97566959 Amo02g2482 02 78488961 78498224 hybridization
Amo14g2654 14 113898573 113909068 Amo02g2482 02 78488961 78498224 PCT
Amo04g1608 04 76472211 76479709 Amo02g2482 02 78488961 78498224 PCT
Amo02g2482 02 78488961 78498224 Amo14g2654 14 113898573 113909068 PCT
Amo02g2482 02 78488961 78498224 Amo04g1608 04 76472211 76479709 PCT