Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2089 ATGGAAGCGAAGAAGCAAGCGGAAGAAGCCATAATGGCGGCAGCGGAGAGAGGTGACGTCGGAGACGGAGACGAAGAGATCAATTCAAAGTTTAGCTTGAAATCCGCTCTCTGGCACGGTGGCTCTGCCTATGATGCATGGTTCAGCTGTTCCTCAAATCAGGTCGCACAGGTTCTGTTAACGCTTCCATACTCATTCTCGCAATTGGGAATGGTTTCGGGGATCATATTCCAAGTGTTCTATGGATTTCTTGGAAGCTGGACCGCTTATTTGATTAGCATTCTCTACATCGAGTACAGAAGCCGCAAGGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTATTAGGACCATCTTGGAAAGCAATTGGATTGGCCTTCAACTGCACTTTTCTTCTCTTTGGATCTGTGATTCAGCTTATAGCTTGTGCAAGCAATATATACTATATAAATGATAAATTGGACAAGAGGACTTGGACCTACATTTTCGGAGCTTGCTGTGCTACCACAGTGTTCATACCATCATTCCATAACTACAGGATTTGGTCCTTCCTTGGCCTTGGCATGACCACCTACACTGCTTGGTATCTCACCATTGCTTCCATTGTTCATGGCCAGGTAGAAAATGTGACCCATTCGGGCCCATCCAAAATGGTATTGTATTTCACAGGCGCCACCAACATTCTCTACACTTTCGGCGGCCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCACAGAAGTTCAAATATATCTATCTTTATGCAACTCTTTATGTGTTCACCCTAACCCTACCATCTGCCACTGCCGTTTACTGGGCCTTTGGTGATCAACTCCTGGACCACTCCAACGCCTTCTCCCTCCTCCCCCGGAACGGTTGGCGGGACGCCGGAGTCATTCTAATGCTCATTCACCAGTTCATCACATTTGGATTTGCCTGTACGCCATTGTATTTTGTGTGGGAAAAAGTGATAGGGATGCATGACACAAAGAGCATATGTTTGAGGGCATTAGCAAGGTTACCAGTGGTAATACCAATATGGTTTCTGGCAATAATCTTCCCATTCTTTGGGCCCATAAACTCAGCTGTGGGTGCTCTCTTGGTCAGTTTCACTGTCTACATCATTCCTGCCTCTGCCCATATGCTCACTTTCAAGTCTGCCTCCTCTAGACAGAATGCTGCAGAGAAATTGCCATGGTTCATCCCTAATTGGACAGTGATGTACATAGTCAACGCATTTGTGGTAGTATGGGTTTTTGTACTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAATTTCATCAAGCAAGTGGACACATTTGGGCTTTTTGCCAAATGCTATCAATGCCCACCAAAAATCCTACCTTCCAAAAATCATACTATTACTATGTATCACTAA 1437 0.4537 MEAKKQAEEAIMAAAERGDVGDGDEEINSKFSLKSALWHGGSAYDAWFSCSSNQVAQVLLTLPYSFSQLGMVSGIIFQVFYGFLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPSWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQVENVTHSGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFKSASSRQNAAEKLPWFIPNWTVMYIVNAFVVVWVFVLGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKILPSKNHTITMYH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2089 478 Pfam Transmembrane amino acid transporter protein 39 432 IPR013057 -
Amo12g2089 478 PANTHER OS05G0424000 PROTEIN-RELATED 3 465 - -
Amo12g2089 478 PANTHER AUXIN INFLUX TRANSPORTER 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2089 Amo-Chr12 97560813 97566959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2089 1 462 Organic Solute Cotransporters AT2G21050 77.922 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2089 K13946 - gmx:100795466 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2089 12 97560813 97566959 Amo02g2482 02 78488961 78498224 hybridization
Amo14g2654 14 113898573 113909068 Amo12g2089 12 97560813 97566959 PCT
Amo04g1608 04 76472211 76479709 Amo12g2089 12 97560813 97566959 PCT
Amo12g2089 12 97560813 97566959 Amo14g2654 14 113898573 113909068 PCT
Amo12g2089 12 97560813 97566959 Amo04g1608 04 76472211 76479709 PCT