Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0733 ATGGATTCATCAATTCAGGAGTTCATGGAGTCATGTAACTCTGACAATAACACCAACAACATAAACAGAAACATAATCAGCAACAATACCAACAATAGCAGCAGCATAGTTGTTGGTGGTGGTGGTTCTTCCCCTTCCGGCGGTGGCTCTTCCAGCACAACCACCACCACGACGAGCACAAGCAGCAGCAGGTATGAGAATCAGAAGAGGCGTGACTGGAACACGTTTGGCCAGTATCTGAAGAATCACCGACCCCCTTTGTCCCTCTCTAGGTGCAGCGGTGCACATGTTCTTGAATTTCTAAGGTACTTGGACCAATTTGGAAAGACAAAGGTTCACACACCAATCTGTCCATTTTACGGGCACCCAAACCCGCCGGCGCCATGTCCATGCCCACTCAGGCAAGCTTGGGGAAGTCTTGATGCTCTCATCGGCCGTCTTAGGGCAGCTTTTGAGGAGAACGGAGGGAAGCCTGAAGCCAACCCGTTCGGTGCTAGGGCCGTTAGACTTTACCTTCGCGAAGTTCGAGATCTTCAGTCCAAAGCCAGAGGAATCAGTTATGAGAAGAAGAAGCGCAAGCGTCCACCTCAGCAACATAACCACCATAACCACCACCAACACCAACACCAACAGCAGCAGCAACAACAAACTCTGTCAATGGCTATGCCGTTGATGCCGCTTTTAAATCATCATCATCATCATCACCACCATCATCATCATCAGCTTCCGCCTCCAGGTGCAACCCAATAA 750 0.4973 MDSSIQEFMESCNSDNNTNNINRNIISNNTNNSSSIVVGGGGSSPSGGGSSSTTTTTTSTSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQHNHHNHHQHQHQQQQQQQTLSMAMPLMPLLNHHHHHHHHHHHQLPPPGATQ* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0733 249 PANTHER PROTEIN G1-LIKE2 4 249 IPR040222 -
Amo12g0733 249 ProSiteProfiles ALOG domain profile. 64 191 IPR006936 -
Amo12g0733 249 MobiDBLite consensus disorder prediction 1 68 - -
Amo12g0733 249 MobiDBLite consensus disorder prediction 1 64 - -
Amo12g0733 249 Pfam ALOG domain 57 177 IPR006936 -
Amo12g0733 249 PANTHER G1-LIKE PROTEIN 4 249 - -
Amo12g0733 249 MobiDBLite consensus disorder prediction 186 208 - -
Amo12g0733 249 MobiDBLite consensus disorder prediction 181 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0733 Amo-Chr12 15358646 15360679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0733 - - aip:107625036 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0733 12 15358646 15360679 Amo19g1925 19 63231909 63232670 ECH
Amo12g0733 12 15358646 15360679 Amo12g0733 12 15358646 15360679 ECH
Amo12g0733 12 15358646 15360679 Amo09g1392 09 44037812 44039029 hybridization
Amo16g1168 16 19811943 19813074 Amo12g0733 12 15358646 15360679 PCT
Amo12g0733 12 15358646 15360679 Amo16g1457 16 26394292 26396514 PCT
Amo12g0733 12 15358646 15360679 Amo06g0272 06 3671382 3673599 PCT