Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1392 ATGGATTTGGTTTCTGAATCATCACCACCAGCATCAAACGCCACAGTTCCGACAACCACCACCGTCAACGGTGTTGGCGGAGGAGGAGGAAGTAACAGCGTTGTAGCCGTTTCTTCATCTTCATCTTCTTCTTCTTCTCCTTCATCGAGCCGTTATGAGAACCAAAAGCGGCGAGACTGGAATACGTTCTGTCAGTACCTCCGCAACCACCGTCCGCCGCTCTCGCTGAACCTCTGCAGCGGCGCACACGTGCTCGAGTTCCTTCACTACCTCGATCAGTTCGGAAAAACGAAAGTTCACAACCATAACTGCCCCTTCTTCGGCCTCCCGAACCCTCCGGCGCCCTGCACCTGCCCGCTCCGCCAAGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGGCTTAGGGCGGCCTATGAGGAGAACGGCGGCAGGCCGGAGTCCAACCCGTTCGGCGCCAGAGCAGTTAGGATTTACCTTCGTGATGTCAGAGATTTTCAGGCCAAAGCTAGAGGAGTCAGTTATGAGAAGAAGAGGAAGAGGCCGAAGCCGAAGGTCAACAATAATGACGGTGCCATGGCCGCCGCTGCCACTACTACTACTTAA 603 0.5622 MDLVSESSPPASNATVPTTTTVNGVGGGGGSNSVVAVSSSSSSSSSPSSSRYENQKRRDWNTFCQYLRNHRPPLSLNLCSGAHVLEFLHYLDQFGKTKVHNHNCPFFGLPNPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGRPESNPFGARAVRIYLRDVRDFQAKARGVSYEKKRKRPKPKVNNNDGAMAAAATTTT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1392 200 MobiDBLite consensus disorder prediction 1 51 - -
Amo09g1392 200 PANTHER PROTEIN G1-LIKE2 1 189 IPR040222 -
Amo09g1392 200 ProSiteProfiles ALOG domain profile. 51 178 IPR006936 -
Amo09g1392 200 Pfam ALOG domain 41 164 IPR006936 -
Amo09g1392 200 MobiDBLite consensus disorder prediction 170 200 - -
Amo09g1392 200 MobiDBLite consensus disorder prediction 1 54 - -
Amo09g1392 200 PANTHER PROTEIN G1-LIKE5 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1392 Amo-Chr9 44037812 44039029 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1392 - - adu:107465837 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0733 12 15358646 15360679 Amo09g1392 09 44037812 44039029 hybridization
Amo16g1168 16 19811943 19813074 Amo09g1392 09 44037812 44039029 PCT
Amo09g1392 09 44037812 44039029 Amo16g1457 16 26394292 26396514 PCT
Amo09g1392 09 44037812 44039029 Amo06g0272 06 3671382 3673599 PCT