Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1168 ATGGATTTGGTAACCGATCCAACAAACCGGAGCTTCGAAATCCAGAGCCTGGTGAATCCAACAGCAGCAACAAACACCAATCCTCCACCTTCGTCATCTTCATCGCCGAGCCGTTACGAGAACCAAAAGCGCCGAGACTGGAACACCTTCTGCCAGTACCTGAGGAACCACCGTCCGCCGCTGTCTCTGCCGCTCTGCAGCGGCGCACACGTTCTGGAGTTCCTCCATTACCTGGATCAGTTCGGGAAGACCAAGGTGCACAACCCTACGTGCCCCTTCTTCGGGCTCCCTAACCCTCCGGCGCCCTGCCCCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTGGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCAGAGCAGAGACGAATCCGTTCGGCGCTCGTGCCGTTAGGATTTACCTGAGAGATGTTCGTGATTTTCAGTCAAAAGCAAGAGGAGTAAGCTACGAGAAGAAGCGCAAGAGGCCAAAGCCTAAAACCTCTTCTTCTTCTTCTGATGCTTCTGCTACTCATGCTTAA 555 0.5748 MDLVTDPTNRSFEIQSLVNPTAATNTNPPPSSSSSPSRYENQKRRDWNTFCQYLRNHRPPLSLPLCSGAHVLEFLHYLDQFGKTKVHNPTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAETNPFGARAVRIYLRDVRDFQSKARGVSYEKKRKRPKPKTSSSSSDASATHA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1168 184 Pfam ALOG domain 32 151 IPR006936 -
Amo16g1168 184 PANTHER PROTEIN G1-LIKE2 17 180 IPR040222 -
Amo16g1168 184 MobiDBLite consensus disorder prediction 17 41 - -
Amo16g1168 184 PANTHER PROTEIN G1-LIKE5 17 180 - -
Amo16g1168 184 MobiDBLite consensus disorder prediction 157 184 - -
Amo16g1168 184 MobiDBLite consensus disorder prediction 17 38 - -
Amo16g1168 184 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1168 Amo-Chr16 19811943 19813074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1168 - - gmx:100791424 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1168 16 19811943 19813074 Amo12g0733 12 15358646 15360679 PCT
Amo16g1168 16 19811943 19813074 Amo09g1392 09 44037812 44039029 PCT