Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01578 ATGCCAACCCCGGTGGCAGCAGCCCGGCAATGCCTAACACCAGAGGCTGCCCGCGCCCTCGACGAGGCGGTGTCCGTTGCCCGCCGTCGCGGCCACGCCCAAACCACCTCTCTCCACGCCATCTCCGCCCTCCTCTCCCTCCCCTCCTCCTCCCTCCTCCGCGACGCATGCTGCCGCGCCCGCAACTCCGCCTACTCGCCGCGCCTTCAGTTCAAGGCCCTCGACCTCTGCCTCTCCGTGTCCCTCGACCGCTCCCCTTCCTCCAACCCATCCACTGACCCGCCCGTCTCCAACTCCCTCATGGCAGCCATCAAGCGGTCTCAGGCCAATCAGCGCCGACACCCTGACACGTTCCATAACCAACTCTTGTTCCAAAGTAACCACTCTAACAACCTCCAACAAACTCAGCAACCGTTTTCTGTTTCGTCGGTTAAAGTTGAGCTGCAGCATTTGGTGATATCGATTCTTGATGACCCGGTTGTCAGTCGGGTTTTCGCTGAAGCGGGTTTCCGGAGCTCCGAAATTAAGCTCGCGATACTCAGGCCCTTGCCGCAGCTTTTTCGCTACTCGAGATCGCGTGGGCCGCCGGTTTTTCTATGTAACTTGCCGGAACAAGGCCGCCGGGGAGGGTTTTTCGGGTTCCCGTTTTCCGGCCGCGGAGACGGAGGGGAGGAGGAGAGTTTCAGGAGGATTGGGGAGGTTCTGGTGAGAAGCAAGGGGAGGAACCCGGTGCTGCTTGGCGCGTGTGCTGGCGAGGCGATGCGGCAGTTCGTGGAGGCGGTGGAGAAGCGGAGGGAGGGGGTGCTGCCGGTGGAGCTGGTAGGGTTGAGGATTGTGTCCGGGATTAGGGAAGCGGAGGAGGTGGCGGAGAAGGGCGTGGGGCCAGGAGTGGTGGTGAATTTGGGGGACTTGAAGGGTTTTGTGGCGGAGGAGGAGAATAACGGCGGTGAAGAGGGTGTTCTTGGGGAACTGGGGCGGTTGTTGAAGGTTCATAGTGAGAGGGTATGGTTGATTGGTTTTGCTGGGAGCTATGAGTCTTACTTAAAATTTGTTGGAAGGTTTCCTTTTGTCGAGAAAGATTGGGATTTGCAGCTTCTTCCCATTACTTCTCTTCAATCTTGCCAGAGACCAAGGTCCAGTTTAATGGATTCATTTGTACCATTTGGTGGATTTTTCTCTTCCCCTTCCGATTTGAAAAGTCCACTACCTGGCTGTATTCCCAATCTCAGGCACCGTCAAAACAGCGAAAGGTGTGAACAAGAAGTGCCTGCTCCAAAGGAAAGATTTTCTTCTTTGGCTGTTGAACCATGTCAATCTAACTATCAGCCATGGCTACAGATTGCAGAAATCAATGCAGCAAAAGGATTGAATGCTAAGGGATTTTCCGAAGCAAATTCTTGTCCGAATGTTATGGGTTTTCTTTGTACTAAAGATAAAAAGAAAGATGCTGAAAATCGTGACAGCAAAGTTACAGACAATTCTCCTGTTGAAGTCATCGATCTAAACTCGGAAGTTCCAGCCAATTTGCAAATTCTGTCTACATCACTACCAACCAGTTCTTTTTCTTTGGCCTTCAAGGAAATGCAGGGGAAGCATACTTCGAAACCTATGTTCCAAAAAGCGGAAGATCTCGACTCAGCTGACCTGAGATCATGCAACATCTCCAATTCAAGTGTGTGCGATGGTAGTGAAATGTCTCCAACTTCAGTTAATTCTGTAACCACAGATCTGGGTTTAGGACTATGTTCTTCTCCTACCAGCAATAAATTTAAGAAACCTATTGACGAATATTCAATGGGTCCTCCAAAGCAAATTGGGAGTCAATTTTCTTCCAACTTCAATTTGGCTGATGGGAATATCTTGAAACATATGTCACAGTCTTCTTCCTGCTTAAGTTTCGACCATGTTAGACAAGTTGATGCTAGAAATCCCAAAAGCCTTTTTGAAGTTCTATCGAAGGAGGTAACCTGGCAAGACGAAGCATTACATGCTATCGTCAAAGCAATAGTTTGCAGTTCAACAAAAAGGATTAGACAATGTGGAGCAATTCAACGAGGTGATTTATGGATGAATTTTGTGGGACCTGATAGGCACGGCAAAAAGAAAGTAGCCGTTGCTTTAGCTGAGATTTTGTATGGAAGTCGGGACAGCTTTATTTGTATGGATCTAGGTTCCAAAGAAATGAGAGCATGCAATGCTGTTAAATTTAGGGGGAAGACTACTCTTGATTTTATTGTGGGGGAGTTTTGCAAGAAAACTTTGTCTGTGGTTTTTCTTGAAAATGTAGATAAGGCAGATGGAGTAACTCAAAGCAGTTTGTTGCAAGCCATCAGGACGGGGAAAATAACAGACTCGCACGGACGAGAAATCGGATTAAACAATGCCACATTTGTGACTTCGTTTTTAAATTATAAAGATAGTTTGACCTTAACAGAAGAACCTTCCAACTATCCTGAGGAAAGGATACTAATGGCAAAAAGAGGAGCTATCAAGATCAAAGTTGAACATGCCATTGGAGACATCATATCTAACAGATTGAGAGATGTTATGCCAAATCTAATTTTTGTAAATAAACGAAAATTGATTGGTGATAATGAATTTCACCACGATCGACATTTAATCTCAGATGTGCCTAAAAGGGCACATATAGCATCAAATTGGCTTTTGGATTTGAATCTTCCAGCTGAAGAGAGTGAATCGCAACAAATGGACATTGAAAATTCCAAACATGTCTCAACTGGGAACAACCAAAACATTTGGTTGCAAGATTTGTGTGATCAAGCTTACCAAACAGTTGTTTTCAAACCTTTCGATTTTGATGCGCTGGAAGATAGAGTGTTAAAAGTAATTAGAAGTAACTTCAACAAGATTCTTGGATCAGAATGTGTCTTACAAATTCAGTCAGAAGTCATTGACCAGTTGCTAGCAGCAGCATATGTCTTGGACCAGGATACAGTGGTGAAGTGGGTGGAGCAAGTTCTGAGCGAAGGATTCCTTGAAGTACAGAGAAGGTGCAACCCCACAGCTAGTTCAATTGTGAAACTTGCTTCATATCAAGATCAAGCTTTAAGTGTATACCTTCCACCAACAATACTTTTGGATTGA 3105 0.4647 MPTPVAAARQCLTPEAARALDEAVSVARRRGHAQTTSLHAISALLSLPSSSLLRDACCRARNSAYSPRLQFKALDLCLSVSLDRSPSSNPSTDPPVSNSLMAAIKRSQANQRRHPDTFHNQLLFQSNHSNNLQQTQQPFSVSSVKVELQHLVISILDDPVVSRVFAEAGFRSSEIKLAILRPLPQLFRYSRSRGPPVFLCNLPEQGRRGGFFGFPFSGRGDGGEEESFRRIGEVLVRSKGRNPVLLGACAGEAMRQFVEAVEKRREGVLPVELVGLRIVSGIREAEEVAEKGVGPGVVVNLGDLKGFVAEEENNGGEEGVLGELGRLLKVHSERVWLIGFAGSYESYLKFVGRFPFVEKDWDLQLLPITSLQSCQRPRSSLMDSFVPFGGFFSSPSDLKSPLPGCIPNLRHRQNSERCEQEVPAPKERFSSLAVEPCQSNYQPWLQIAEINAAKGLNAKGFSEANSCPNVMGFLCTKDKKKDAENRDSKVTDNSPVEVIDLNSEVPANLQILSTSLPTSSFSLAFKEMQGKHTSKPMFQKAEDLDSADLRSCNISNSSVCDGSEMSPTSVNSVTTDLGLGLCSSPTSNKFKKPIDEYSMGPPKQIGSQFSSNFNLADGNILKHMSQSSSCLSFDHVRQVDARNPKSLFEVLSKEVTWQDEALHAIVKAIVCSSTKRIRQCGAIQRGDLWMNFVGPDRHGKKKVAVALAEILYGSRDSFICMDLGSKEMRACNAVKFRGKTTLDFIVGEFCKKTLSVVFLENVDKADGVTQSSLLQAIRTGKITDSHGREIGLNNATFVTSFLNYKDSLTLTEEPSNYPEERILMAKRGAIKIKVEHAIGDIISNRLRDVMPNLIFVNKRKLIGDNEFHHDRHLISDVPKRAHIASNWLLDLNLPAEESESQQMDIENSKHVSTGNNQNIWLQDLCDQAYQTVVFKPFDFDALEDRVLKVIRSNFNKILGSECVLQIQSEVIDQLLAAAYVLDQDTVVKWVEQVLSEGFLEVQRRCNPTASSIVKLASYQDQALSVYLPPTILLD 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01578 1034 PANTHER PROTEIN SMAX1-LIKE 8 1 1031 - -
Aip10g01578 1034 ProSiteProfiles Clp repeat (R) domain profile. 8 185 IPR004176 -
Aip10g01578 1034 Gene3D - 10 181 IPR036628 -
Aip10g01578 1034 SUPERFAMILY Double Clp-N motif 12 118 IPR036628 -
Aip10g01578 1034 Gene3D - 616 852 IPR027417 -
Aip10g01578 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 995 IPR027417 -
Aip10g01578 1034 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01578 Aip-Chr10 30662692 30666911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01578 - - gmx:100800606 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01491 07 26199859 26204528 Aip10g01578 10 30662692 30666911 ECH
Aip02g03176 02 108521255 108525270 Aip10g01578 10 30662692 30666911 ECH
Aip01g00397 01 4828111 4835176 Aip10g01578 10 30662692 30666911 ECH
Aip10g01578 10 30662692 30666911 Aip10g01578 10 30662692 30666911 ECH