Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01491 ATGCTCGCCGGCGATGCCGACGCCGGTAAGCGCAGCGAGGCAATGCTTGACAGACGAGGCGGCACGTGCTCTCGACGACGCTGTCGCGGCACTGCCGTCACCGCTGTAGCCGCAGCCGTAACCGTCTCCCCGCGCCTCCAGCTGCGCGCCCTAGAACTCTCCGTCGGCGTGTCCCTCGACCGCCTCCCCTCCTCTAAACCCTCATCGACCTCCTCCACCGCCGACGACGACGGACCTCCGGTGTCGAATTCCCTCATGGCGGCCATAAAACGCTCCCAGGCGAACCAACGGCGCCACCCGGATACCTTCCACTTGATGCAAATCCACAATCACCAAAACCCTCAGTTCAATCAAGGAACCGCATCGTTTCTGAAAGTTGAGCTCAAACACTTCGTTCTTTCAATCTTAGATGATCCAATCGTGAGTCGCGTCTTCGGCGAAGCGGGTTTTCGGAGCCCCGACATAAAACTCGCACTTCTTCAGCCTCCTAACCCTCCGCCTTCTTCCAGAATCTTCTCAAGAACGCGCTACCCGCCCCCTCTCTTCCTCTGCAGTCTTGACTCGGGTCGACCCGGACCCGGTTTCTCTTCCGGGTTCCCATTCCTGGACGAGAACTGCAGAAGGGTTGCGGATATTCTAACGCGGAAGAACAAGAGAAACCCTTTGCTTATGGGTGTTTACGCGAAAACCGCGCTCAGAAGCTTCGTTGAGATGATCGAGAAGGGTCGTGGTGTTGCAATGTTCCCACCAGAAATGGCTGCGGTTAATGTCATCTCGGTGGAGAACGAGATTCAAGAATTCTTGATTTCTGGCGCCATGAGTGAGGAGAAGATGGGGTTGAGGTTTGAGGAGTTGGGTCGAGAAGCCGATCAATGCTCCAATGGTGGTGGTGTTGTTGTGAGCTTTGGGGATGTTGCGGCTTTTGTTAAAGATGGAGTGGATAGTGGTGCTGTTGGGTTTGTTCTTTCGAGGATAACGAGGTTGTTGTTGGACGGTGGTGGGGGTGGAGGGAAGGTTTGGTTGGTTGGGGTGGCGGAGAAGTGTGATGCGTATTCAAAGTTATTGGGTTTGTTCCCAAATGTGGAAAAAGATTGGGATCTGTATCCTATGACCGTCACGTCTGCTACACCTTCAATGGAAGGACTCTACCCTAAATCCAGCTTGATGGGGTCCTTCATTCCATTTGGTGGGTTCTTTTCTACACCACCTGAAATCAAAACTCCTGTAAGCTGTTCAAGTGCATCTTTTGCGCGTTGTGACGAATGCAATGAAAAATATGAAGAAGAAGTTGCTGATTTGAAGGTTAATGAAGAAAGCACAAGTTTGAACGAGAGGATCCTGGGTTGTCAAAAGAAATGGAACGACATTTGCCGTAATCTTCATCACACTAGATCAGTTGATAATTCTCAAACAAGACCTCAAGCTCCATCACTTGAGGGTTTACGGTTTGGCTCTGGGTTTACGGAAAGCGGCAGTAAAGATCCATCACACATAGAAGTCCAATATTCTAATCAAACTTCCTACCTACCTAGAGAGCCGCCTAGTATTTATCCATTGAAACAGTTGCCATCTGTTCCGGAATCTTCTGATACAGCCAGTATCAGTACCGGAACTGATCATGTACTGAAATTTTCAGGGATTCAGTTGACTGATGTGCGGATGCCATGGATTGCCCCTTCCTCTATGGCCAATACAAGTCTTCTTGATCACAGTTCATCTTCATCCCTTACACCTGTGACCACAGATTTAGGATTGGGCACAATATATACATCAGCAGCTCAAGAGCCAGATACCCCAAAACTACAGGATCACAAAAAGCATCTTCCAAACTTGTCGGAATCTCTGTCAATTGATTTTTTTGATGCCCCAAATGAGAATGCTTCACACCAAACACCTAGATCTGCTTGCTCTTTTCCAAATTCAGAAGGAAATTTTGATTCGGTAGATCTCAAATCTCTAAATCAACTTCTTGCTGAAAAGGTTGGCTGGCAAGATGATGCCATCTATGCAATAAATCGAAGTCTGTTCCTTTGTAATTCTGGTGCAGGAAAACGTAAAGGCTCCAGAGCTGGCATATGGTTTGCTTTCCTTGGACCAGATAGGATCAGCAAAAAGAAAATTGCTGCAGCTCTTGCAGAGATTATATTTGGAAACAGAGAAAATCTAATATCCGTAGATCTAAGCTTGCAGGACAGGTCTTTCTCATTGAACTCTGTTTTTGATTGCGAAATATCACATTGTCATGATGCGCTGAGAAGGAAGACTGTTGTGGATTATATTGCTGGGGAGTTGAGTAAAAGGCCACTTTCGGTTGTTTTTCTTGATCATGTCGATAAAGCTGATTACCTTGTGCAGACTAGTTTGTCACAGGCGTTAAAAACAGGTAAATTTCCAGATTCTCATGGAAGGGAAATCAGCATCAACAACAGAATCTTTATAGTAGCCTCAACTGTCAGTAAAGGTAATAGTAATAGCTCTTCTATATCCGAGGGATCGAAAATGTTCTCTGAGGAAAGAATCCTTGAAGCCAAGAAATTTCAAATGCAGCTAATACTTGGACATACTGCATCTGAGGATGCCATAAAAAGGGGTATCACAAATGTTCAGGTTATTCGTGGAAAAGGGTCCTCCAAACCACCATTTCTTAGCAAAAGGAAGCAAGCTGATACTAATGACTCCAAAGAGGTGGGAAACACATGCAAGATGCAGAAACAGGTCAGGGAGAAATCAAGATCCTATCTGGATCTAAACATGCCTCTAAACGAGGCCGAAGAATGCATCAATGACAATGACAACGAGATGGAAAACTCAGGAGCATGTTCCACTGATATCTGTAATCAAATTGAAGAAAAAGTGTTATTTAAGCCATTCAATTTTGATGCACTTGCTGATGAATTGTTGAAAAGCATTAGCACACAATTCCAGAGAGCATTTAGTTCAGATTTTCAGCTGGAAATTGAATATGATGTAATGGTACAGATTCTTGCAGCTGCATGGTTATCAGAGAAGAAAAATGCAGTGGAGGATTGGATTGAACGTGTTCTTGGAAGAGCTTTTGCTGAAGCCAAACAGAAAAAACACAGTGCATCACCATCTCAGTATGTGATGAAACTGGTCAACTGTGAATCCAATTTTGTGGAAGAGAATGCTCCTGGTGGATTGTGTCTTCCTTCTAGAATTAACCTCAACTGA 3192 0.4561 MLAGDADAGKRSEAMLDRRGGTCSRRRCRGTAVTAVAAAVTVSPRLQLRALELSVGVSLDRLPSSKPSSTSSTADDDGPPVSNSLMAAIKRSQANQRRHPDTFHLMQIHNHQNPQFNQGTASFLKVELKHFVLSILDDPIVSRVFGEAGFRSPDIKLALLQPPNPPPSSRIFSRTRYPPPLFLCSLDSGRPGPGFSSGFPFLDENCRRVADILTRKNKRNPLLMGVYAKTALRSFVEMIEKGRGVAMFPPEMAAVNVISVENEIQEFLISGAMSEEKMGLRFEELGREADQCSNGGGVVVSFGDVAAFVKDGVDSGAVGFVLSRITRLLLDGGGGGGKVWLVGVAEKCDAYSKLLGLFPNVEKDWDLYPMTVTSATPSMEGLYPKSSLMGSFIPFGGFFSTPPEIKTPVSCSSASFARCDECNEKYEEEVADLKVNEESTSLNERILGCQKKWNDICRNLHHTRSVDNSQTRPQAPSLEGLRFGSGFTESGSKDPSHIEVQYSNQTSYLPREPPSIYPLKQLPSVPESSDTASISTGTDHVLKFSGIQLTDVRMPWIAPSSMANTSLLDHSSSSSLTPVTTDLGLGTIYTSAAQEPDTPKLQDHKKHLPNLSESLSIDFFDAPNENASHQTPRSACSFPNSEGNFDSVDLKSLNQLLAEKVGWQDDAIYAINRSLFLCNSGAGKRKGSRAGIWFAFLGPDRISKKKIAAALAEIIFGNRENLISVDLSLQDRSFSLNSVFDCEISHCHDALRRKTVVDYIAGELSKRPLSVVFLDHVDKADYLVQTSLSQALKTGKFPDSHGREISINNRIFIVASTVSKGNSNSSSISEGSKMFSEERILEAKKFQMQLILGHTASEDAIKRGITNVQVIRGKGSSKPPFLSKRKQADTNDSKEVGNTCKMQKQVREKSRSYLDLNMPLNEAEECINDNDNEMENSGACSTDICNQIEEKVLFKPFNFDALADELLKSISTQFQRAFSSDFQLEIEYDVMVQILAAAWLSEKKNAVEDWIERVLGRAFAEAKQKKHSASPSQYVMKLVNCESNFVEENAPGGLCLPSRINLN 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01491 1063 Coils Coil 423 443 - -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 1 25 - -
Aip07g01491 1063 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 434 1063 - -
Aip07g01491 1063 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 36 433 - -
Aip07g01491 1063 Gene3D - 640 870 IPR027417 -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 465 535 - -
Aip07g01491 1063 CDD AAA 707 817 - -
Aip07g01491 1063 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 36 433 - -
Aip07g01491 1063 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 434 1063 - -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 61 83 - -
Aip07g01491 1063 Pfam AAA domain (Cdc48 subfamily) 693 847 IPR003959 GO:0005524|GO:0016887
Aip07g01491 1063 Gene3D - 14 162 IPR036628 -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 61 79 - -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 489 511 - -
Aip07g01491 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 818 IPR027417 -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 875 897 - -
Aip07g01491 1063 ProSiteProfiles Clp repeat (R) domain profile. 1 165 IPR004176 -
Aip07g01491 1063 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01491 Aip-Chr7 26199859 26204528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01491 - - ahf:112702898 1907.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01491 07 26199859 26204528 Aip07g01491 07 26199859 26204528 ECH
Aip07g01491 07 26199859 26204528 Aip10g01578 10 30662692 30666911 ECH
Aip02g03176 02 108521255 108525270 Aip07g01491 07 26199859 26204528 ECH
Aip01g00397 01 4828111 4835176 Aip07g01491 07 26199859 26204528 ECH
Aip07g01491 07 26199859 26204528 Aip01g00397 01 4828111 4835176 ECH
Aip01g00397 01 4828111 4835176 Aip07g01491 07 26199859 26204528 PCT