Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04011 ATGACAGAAGAGGAGCAACCCAATAAGGTGGACGAGGAGAAATCTGTAATTCCACAACTACCTCCTACAGATAACAAGCATGATGATGAATCCAAAGCTCTTGCCATAGTTGAGAAGACTGAGGAAGGTGCTGAAGAGAAACCCTCTGAGGGATCTATCAACAGAGATGCTGTGCTTGCAAGAGTTGCAACAGAGAAGAGGATGTCATTGATCAAAGCCTGGGAAGAAAGTGAGAAATCAAGAGCAGAGAACAAAACTCAGAAGAAGCTTTCATGCATTTCATCATGGGAGAAGAGTAAAATAGCTTCCACGGAGGCTGAACTGAAAAAGATTCATCAACAACTGGAGAAGAAAAAGGCAGAACATGCAGAGAAATTGAGAAACAAGATAGCAGCAATTCACAGGGAAGCTGAAGAGAAGAGGGCATTCACTGAGGCCAAGAAAGGGGAAGATATCCTCAAGGCAGAGGAGACAGCTGCAAAGTATAGAGCAACTGAAACAGCTCCAAAGAAAATCTTTGGTTGTTTCTAA 531 0.4294 MTEEEQPNKVDEEKSVIPQLPPTDNKHDDESKALAIVEKTEEGAEEKPSEGSINRDAVLARVATEKRMSLIKAWEESEKSRAENKTQKKLSCISSWEKSKIASTEAELKKIHQQLEKKKAEHAEKLRNKIAAIHREAEEKRAFTEAKKGEDILKAEETAAKYRATETAPKKIFGCF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04011 176 MobiDBLite consensus disorder prediction 1 56 - -
Aip09g04011 176 PANTHER OS02G0117200 PROTEIN 4 176 - -
Aip09g04011 176 PANTHER REMORIN 1.4 4 176 - -
Aip09g04011 176 MobiDBLite consensus disorder prediction 23 52 - -
Aip09g04011 176 Pfam Remorin, N-terminal region 9 62 IPR005518 -
Aip09g04011 176 Pfam Remorin, C-terminal region 66 171 IPR005516 -
Aip09g04011 176 Coils Coil 101 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04011 Aip-Chr9 146481379 146482691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04011 - - gmx:100499700 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03819 05 146423968 146426493 Aip09g04011 09 146481379 146482691 ECH
Aip05g01053 05 15108299 15110713 Aip09g04011 09 146481379 146482691 ECH
Aip03g03239 03 105653521 105654786 Aip09g04011 09 146481379 146482691 ECH
Aip09g04011 09 146481379 146482691 Aip09g04011 09 146481379 146482691 ECH