Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03819 ATGACAGAAGAGCAACCTCAAACTAGTGTGGAATCACAAAAACCTTCTTCTGATGATCCTTCTCCTGCTGCTACAACTGAGGCTCCTTCTCATGAAGAACATGTTCATGAAGCTTCTAAGGATGTGGCTGAGGAGAAATCTGTAATTCCAGATACCAAGCCTGATGAATCCAAGGCTCTTGTTCTAGTTGAGAAGCCTCTTGTTGAAGAGAAACCATCTGAGGGATCCGTTGACCGAGATGCTGTGCTTGCAAGAGTTGCAACAGAGAAGAGGCTATCACTAGTCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAAAACAAGGCTCACAAGAAGCTTTCAGCCATTTCTGCATGGGAGAACAGCAAGAAAGCTTCTGTGGAGGCTGAGTTGAAAAAAATTGAAGAGCAACTAGAGAAGAAAAAGGCAGAATATGCAGAGAAAATAAAGAACAAAATAGCTGCAATCCACAAAGAAGCTGAAGAAAAGAGAGCTATCATTGAAGCTAAAAAAGGAGAGGATCTCTTGAAGGCAGAGGAGGTAGCTGCAAAGTATAGGGCTACTGGAACTGCTCCAAAGAAACTCCTTGGTTGTTTCTAA 603 0.4245 MTEEQPQTSVESQKPSSDDPSPAATTEAPSHEEHVHEASKDVAEEKSVIPDTKPDESKALVLVEKPLVEEKPSEGSVDRDAVLARVATEKRLSLVKAWEESEKSKAENKAHKKLSAISAWENSKKASVEAELKKIEEQLEKKKAEYAEKIKNKIAAIHKEAEEKRAIIEAKKGEDLLKAEEVAAKYRATGTAPKKLLGCF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03819 200 MobiDBLite consensus disorder prediction 1 24 - -
Aip05g03819 200 PANTHER REMORIN 1.4 1 200 - -
Aip05g03819 200 PANTHER OS02G0117200 PROTEIN 1 200 - -
Aip05g03819 200 Pfam Remorin, C-terminal region 90 195 IPR005516 -
Aip05g03819 200 MobiDBLite consensus disorder prediction 29 59 - -
Aip05g03819 200 MobiDBLite consensus disorder prediction 1 59 - -
Aip05g03819 200 Pfam Remorin, N-terminal region 40 86 IPR005518 -
Aip05g03819 200 Coils Coil 125 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03819 Aip-Chr5 146423968 146426493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03819 - - aip:107644827 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03819 05 146423968 146426493 Aip09g04011 09 146481379 146482691 ECH
Aip05g01053 05 15108299 15110713 Aip05g03819 05 146423968 146426493 ECH
Aip03g03239 03 105653521 105654786 Aip05g03819 05 146423968 146426493 ECH
Aip05g03819 05 146423968 146426493 Aip05g03819 05 146423968 146426493 ECH