Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01053 ATGGAATCATCACAGCTACACTCTCTGGATTCTGTTCAAGTCAAGGAATTGGAGAAACCAGACCCTCCAACTGCAAGTGCTGTGAGCCATCAGAGCCTGGAGGAGCCTAAAGAGCATGCCATCACTGCTCCACTTGTTCAAAAGGTTGAAGATTCTGGTGGCAACAAGGATGCTGAGCTTGCAAGAGTAGTTTCGGAGAAAAGATTGGCTTTAATTAAAGCATGGGAAGAAAGTGAAAAGACCAAAGCAGAGAATAGGGCATACAAGAAGCTCTCAGCCGTTGGATTGTGGGAGAGTAAAAAGAAAGCCTCAGTGGAGGCACAACTCAAGATAATTGAGGAAAACTTAGAAAGAAAGAAAGCAGAATATGCAGAAAAGATGAAGAATAAGATAGCTGATATTCATAGGTCAGCAGAAGAGAAAAGGGCAATGGTTGAAGCTCAAAAGAGGGAAGAGTTTATCGAGTTAGAGGAAACAGCTGCAAAGTTTCGTAGTAGTGGTCGTACACCAGCCAAATTCTTTGCATGTTTTAAAGCATGA 540 0.4259 MESSQLHSLDSVQVKELEKPDPPTASAVSHQSLEEPKEHAITAPLVQKVEDSGGNKDAELARVVSEKRLALIKAWEESEKTKAENRAYKKLSAVGLWESKKKASVEAQLKIIEENLERKKAEYAEKMKNKIADIHRSAEEKRAMVEAQKREEFIELEETAAKFRSSGRTPAKFFACFKA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01053 179 Pfam Remorin, C-terminal region 67 171 IPR005516 -
Aip05g01053 179 PANTHER CARBOXY-TERMINAL REGION REMORIN 11 178 - -
Aip05g01053 179 MobiDBLite consensus disorder prediction 1 55 - -
Aip05g01053 179 PANTHER OS02G0117200 PROTEIN 11 178 - -
Aip05g01053 179 Coils Coil 102 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01053 Aip-Chr5 15108299 15110713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01053 - - adu:107488128 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01053 05 15108299 15110713 Aip05g01053 05 15108299 15110713 ECH
Aip05g01053 05 15108299 15110713 Aip05g03819 05 146423968 146426493 ECH
Aip05g01053 05 15108299 15110713 Aip09g04011 09 146481379 146482691 ECH