Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03239 ATGTTCATGGGAGAGACCTCTGACAATAACTCAAACTCATCGGACTCCGAGGATGTTCCTCACTACTCTTATACCGAAAACAATAAACTCCTCAAATATCAAGAGGCTGCAACTTCTTCTGCCAGAAAGGATACAGGGGATTTAGATGGTCCGCTTGCAAGACTTGAAGCAGAGAAGAAACGGGCTTTGATTAAAGCATGGGAAGAAAGTGAGAAGACTAAAATAGACAACAGGGCTTATAAGATGCAATTTGCTGTTGGATTATGGGAGGATAGCAAGAAAGCATCGGTTGAGGCAAAGCTTAAGAAAAATGCGGAAAAATTGGAGAGAAAGAAGGCTGAGTATTTCGAAAAGATGCAAAATAAAATTGCCGAAATTCATCGGATGGCAGAGGAAAAAAGAGCAGGAATTGAAGCTCAAAGAGGGAAAGGATTGCTCAAGATAGAGGACACTGCTGAAAATTTTCGCACACGTGGCTATTCCCCAAAGAAAATTCTTTCATGCTTTACTGCTTAA 516 0.4089 MFMGETSDNNSNSSDSEDVPHYSYTENNKLLKYQEAATSSARKDTGDLDGPLARLEAEKKRALIKAWEESEKTKIDNRAYKMQFAVGLWEDSKKASVEAKLKKNAEKLERKKAEYFEKMQNKIAEIHRMAEEKRAGIEAQRGKGLLKIEDTAENFRTRGYSPKKILSCFTA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03239 171 Coils Coil 94 125 - -
Aip03g03239 171 PANTHER OS02G0117200 PROTEIN 31 170 - -
Aip03g03239 171 Pfam Remorin, C-terminal region 59 164 IPR005516 -
Aip03g03239 171 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g03239 171 PANTHER CARBOXY-TERMINAL REGION REMORIN 31 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03239 Aip-Chr3 105653521 105654786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03239 - - adu:107479967 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03239 03 105653521 105654786 Aip03g03239 03 105653521 105654786 ECH
Aip03g03239 03 105653521 105654786 Aip05g03819 05 146423968 146426493 ECH
Aip03g03239 03 105653521 105654786 Aip09g04011 09 146481379 146482691 ECH