Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1105 ATGGGGTCTTTGGCAATGGTAGCTGAAAGTGAAGCAAAGAAGAAGAAAGGAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTTCAATCCTTCTCAAAGATGGGGTCACTCTGCTTGCTTCTCCAATTCCCTTATGTATATCTTTGGGGGCTGTTGTGGGGGGCTGCATTTCAGCGATGTTGTGTGTTTAGACCTCGAGAAAATGGCCTGGAGCAAGCTCGCCACCACGGGCGAAAAGCCGGGACCTAGAGATAGCCACAGTGCTGTTCTTGTTGGGAACAAGATGATTGTGTTTGGTGGCACAGATGGCTTCAAGAAGGTAAATGACACTCACATCCTCGACCTTGTCACGAAAGAGTGGATTCGGCCAATGTGTCATGGGACTCCTCCTTCGCCGAGGGAGAGTCACACTGCCACTCTTGTTGGTGACAAGAAGATAGTTATCTTTGGTGGTAGCGGTGAAGGCGAGGCAAACTACTTGAATGATTTGCACATTCTAGACCTTAGAACAATGAAATGGAGTTCGCCTTTGTTGAAAGGCGAATTCCCTGTCCCCAGGGACAGTCACACAACTCTTGCAATAGGCAACAAGCTTGTTGTGTATGGCGGAGATTGTGGCGATCACTATCATGGGGATCTTAGTATGCTTGATATGGAAACAATGACTTGGTCAAAGTTGAAAATTCAAGGTTCTTCACCAGGAGTAAGGGCTGGTCATGCCGCCGTGAATATTGGTACCAAGGTGTACATCATTGGAGGAGTAGGAGATAACCGTTATTATAACGACATTTGGGTCTTTGATATCTGCACTTGTTTGTGGACTCAACTCGATGCTGGTGGTCAACAGCCGCAAGGGCGGTTTTCTCATACGGCCATTGTCATGGACATGGACATTGCCATGTTTGGGGGGTGTGGAGAAGACGAACGTCCTCTAAATGAATTGTTAGTATTGCAGCTTGGAGGGGAGCATCCGATCGGAGGCCATAACATTTCGATGTGCAAAGTTTTTGGAACTTATTGGAATCAAGAAAAGAGGACTATTCCAGAAGCAGATAACAACTTGAATATGCCACCAACAGAAGGACTAGGAAAATGGGGTTGCGAACTAGTTTCGGAGAAAGCGCAGCCTTATCAGTTTGATTCAGGTATTTTGCAACAGAAGAGAAGAAGAATTGCGGCTGCGAAGGTGTGGGATGTTGATTCAGAGCAAGAAGAGCATTCTCTTTCGCATTCGCAGCATTCTTCGCCATCTCAGTCCGATCAAGAACAGACCCCAGGTCAAAAGGTGAATGCATCCGCCATGGATTCGCAACGGTATCATTTGTTCAAACATATCAATAGAATTCCAAGCAATGAAAATGGCTTGAGTAATAAGAAATCTTTGAGTTTAAACAATGTCACACAAAGAAGTCCACAACCACCAGATCTTCATCTCCTAGATCATCAACAGAAACAAGAAGCCGCAGATCAGAAGCCGGTAGCGCGAGGACACGTTCAGCATCTGATTGGTGCTGAAGTTCGAGGGAAGGTCGACGGAGCCTTCGATTCGGGGTTGCTCATGACTGCAACCGTGAATGGAAGAATTTTCAGAGGAGTGTTGTTTGCACCTGGAGCAGGAACAAGCAGTGCTGAGCCAAATTGTTCTTTACCATGTTCATTTTCTTCACCTCATCATCAAACATTGATGAACACAAACCAAGTAGAGATTTTGAGGCATTATTCCAAGCAGGTAGCTAACAATAATAATAATAATAATAGTTCACATGTGGAGAGTTATAATGGTAGGCAAGATCTAATAGCTACTAGACCATTTCCAATAATGAGAGGCACTAATAATGGATCATTATCCAGAGACCATAATAATAATAATAGTAATAAAATGAGGAGTGATCTTCAAGGATTGGCTTTGACACTTGGAGGGCCTGGTAGTAGTGGCAACAATGCTTGA 1947 0.4458 MGSLAMVAESEAKKKKGAMWLYPKVLGFNPSQRWGHSACFSNSLMYIFGGCCGGLHFSDVVCLDLEKMAWSKLATTGEKPGPRDSHSAVLVGNKMIVFGGTDGFKKVNDTHILDLVTKEWIRPMCHGTPPSPRESHTATLVGDKKIVIFGGSGEGEANYLNDLHILDLRTMKWSSPLLKGEFPVPRDSHTTLAIGNKLVVYGGDCGDHYHGDLSMLDMETMTWSKLKIQGSSPGVRAGHAAVNIGTKVYIIGGVGDNRYYNDIWVFDICTCLWTQLDAGGQQPQGRFSHTAIVMDMDIAMFGGCGEDERPLNELLVLQLGGEHPIGGHNISMCKVFGTYWNQEKRTIPEADNNLNMPPTEGLGKWGCELVSEKAQPYQFDSGILQQKRRRIAAAKVWDVDSEQEEHSLSHSQHSSPSQSDQEQTPGQKVNASAMDSQRYHLFKHINRIPSNENGLSNKKSLSLNNVTQRSPQPPDLHLLDHQQKQEAADQKPVARGHVQHLIGAEVRGKVDGAFDSGLLMTATVNGRIFRGVLFAPGAGTSSAEPNCSLPCSFSSPHHQTLMNTNQVEILRHYSKQVANNNNNNNSSHVESYNGRQDLIATRPFPIMRGTNNGSLSRDHNNNNSNKMRSDLQGLALTLGGPGSSGNNA* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1105 648 MobiDBLite consensus disorder prediction 604 627 - -
Ahy9g1105 648 Gene3D - 20 124 IPR015915 GO:0005515
Ahy9g1105 648 SUPERFAMILY Kelch motif 25 226 IPR015915 GO:0005515
Ahy9g1105 648 MobiDBLite consensus disorder prediction 410 432 - -
Ahy9g1105 648 PANTHER OS01G0300900 PROTEIN 8 644 - -
Ahy9g1105 648 MobiDBLite consensus disorder prediction 401 432 - -
Ahy9g1105 648 Pfam Galactose oxidase, central domain 185 233 - -
Ahy9g1105 648 Pfam Galactose oxidase, central domain 132 174 - -
Ahy9g1105 648 Pfam Galactose oxidase, central domain 236 283 - -
Ahy9g1105 648 PANTHER KELCH REPEAT DOMAIN 8 644 - -
Ahy9g1105 648 MobiDBLite consensus disorder prediction 607 627 - -
Ahy9g1105 648 Pfam Galactose oxidase, central domain 43 90 - -
Ahy9g1105 648 Gene3D - 125 345 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1105 Ahy-Chr9 24827292 24831468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1105 59 319 Acyl Lipid Metabolism Gene Families AT3G05420 28.520 1.08e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1105 K20285 - gmx:100787222 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1381 19 31165801 31170039 Ahy9g1105 9 24827292 24831468 hybridization
Ahy16g0882 16 15833909 15837403 Ahy9g1105 9 24827292 24831468 PCT
Ahy6g0478 6 5816667 5820893 Ahy9g1105 9 24827292 24831468 PCT
Ahy9g1105 9 24827292 24831468 Ahy16g0882 16 15833909 15837403 PCT
Ahy9g1105 9 24827292 24831468 Ahy6g0478 6 5816667 5820893 PCT