Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1381 ATGGGGTCTTTGGCAATGGTAGCTGAAAGTGAAGCAAAGAAGAAGAAAGGAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTTCAATCCTTCTCAAAGATGGGGTCACTCTGCTTGCTTCTCCAATTCCCTTATGTATATCTTTGGGGGCTGTTGTGGGGGGCTGCATTTCAGCGATGTTGTGTGTTTAGACCTCGAGAAAATGGCCTGGAGCAAGCTCGCCACCACAGGCGAAAAGCCGGGACCTAGAGATAGCCACAGTGCTGTTCTTGTTGGGAACAAGATGATTGTGTTTGGTGGCACAGATGGCTTCAAGAAGGTAAATGACACTCACATCCTCGACCTTGTCACGAAAGAGTGGATTCGGCCAATGTGTCATGGGACTCCTCCTTCGCCGAGGGAGAGTCACACTGCCACTCTTGTTGGTGACAAGAGGATAGTTATCTTTGGTGGTAGCGGTGAAGGCGAGGCAAACTACTTGAATGATTTGCACATTCTAGACCTTAGAACAATGAAATGGAGTTCGCCTTTGTTGAAAGGCGAATTCCCTGTCCCCAGGGATAGTCACACAACTCTTGCAATAGGCAACAAGCTTGTTGTGTATGGCGGAGATTGCGGCGATCACTATCATGGGGATCTTAGTATGCTTGATATGGAAACAATGACTTGGTCAAAGTTGAAAATTCAAGGTTCTTCACCAGGAGTAAGGGCTGGTCATGCCGCCGTGAATATCGGTACCAAGGTGTACATCATTGGAGGAGTAGGAGATAACCGTTATTATAATGACATTTGGGTCTTTGATATCTGCACTTGTTCGTGGACTCAACTCGATGCTGGTGGTCAACAGCCGCAAGGGCGGTTTTCTCATACGGCCATTGTCATGGACATGGACATTGCCATGTTTGGCGGGTGTGGAGAAGACGAACGTCCTCTAAATGAATTGTTAGTATTGCAGCTTGGAGGGGAGCATCCGATCGGACGCCATAACATTTCGATGTGCAAAGTTTTTGGAACTTACTGGAATCAAGAAAAGAGGACTATTCCAGAAGCAGATAACAACTTGAATATGCCACCAACAGAAGGACTAGGAAAATGGGGTTACGAACTAGTTTCGGAGAAAGCGCAGCCTTATCAGTTTGATTCAGGTATTTTGCAACAGAAGAGAAGAAGAATTGCGGCTGCGAAGGTGTGGGATGTTGACTCAGAGCAAGAAGAGCATTCTCTTTCGCATTCGCAGCATTCTTCGCCATCTCAGTCCGATCAAGAACAGACCCCAGGTCAAAAGGTGAATGCATCCGTCATGGATTCGCAACGGTATCATTTGTTCAAACATATCAATAGAATTCCAAGCAATGAAAATGGCTTGAGTAATAAGAAATCTTTGAGTTTAAACAATGTCACACAAAGAAGTCCACAACCACCAGATCTTCATCTCCTAGATCATCAACAGAAACAAGCAGCCGCAGATCAGAAGCCGGTAGCGCGAGGACACGTTCAGCATCTGATTGGCGCTGAAGTTCGAGGGAAGGTCGACGGAGCCTTCGATTCGGGGTTGCTCATGACTGCAACCGTGAATGGAAGAATTTTCAGAGGAGTGTTGTTTGCACCTGGAGCAGGAACAAGCAGTGCTGAGCCAAATTGTTCTTTACCATGTTCATTTTCTTCACCTCATCATCAAACATTGATGAACACAAACCAAGTAGAGATTTTGAGGCATTATTCCAAGCAGGTAGCTAACAATAATAATAATAATAATAATAATAATAATAGTTCGCATGTAGAGAGTTATAATGGTAGGCAAGATCTAATAGCTACTAGACCATTTCCAATAATGAGAGGCACTAATAATGGATCATTATCCAGAGACCATAATAATAATAATAATAAAATGAGGAGTGATCTTCAAGGATTGGCTTTGACACTTGGAGGGCCTGCTAGTAGTGGCAACAATGCTTGA 1956 0.4448 MGSLAMVAESEAKKKKGAMWLYPKVLGFNPSQRWGHSACFSNSLMYIFGGCCGGLHFSDVVCLDLEKMAWSKLATTGEKPGPRDSHSAVLVGNKMIVFGGTDGFKKVNDTHILDLVTKEWIRPMCHGTPPSPRESHTATLVGDKRIVIFGGSGEGEANYLNDLHILDLRTMKWSSPLLKGEFPVPRDSHTTLAIGNKLVVYGGDCGDHYHGDLSMLDMETMTWSKLKIQGSSPGVRAGHAAVNIGTKVYIIGGVGDNRYYNDIWVFDICTCSWTQLDAGGQQPQGRFSHTAIVMDMDIAMFGGCGEDERPLNELLVLQLGGEHPIGRHNISMCKVFGTYWNQEKRTIPEADNNLNMPPTEGLGKWGYELVSEKAQPYQFDSGILQQKRRRIAAAKVWDVDSEQEEHSLSHSQHSSPSQSDQEQTPGQKVNASVMDSQRYHLFKHINRIPSNENGLSNKKSLSLNNVTQRSPQPPDLHLLDHQQKQAAADQKPVARGHVQHLIGAEVRGKVDGAFDSGLLMTATVNGRIFRGVLFAPGAGTSSAEPNCSLPCSFSSPHHQTLMNTNQVEILRHYSKQVANNNNNNNNNNNSSHVESYNGRQDLIATRPFPIMRGTNNGSLSRDHNNNNNKMRSDLQGLALTLGGPASSGNNA* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1381 651 PANTHER OS01G0300900 PROTEIN 8 647 - -
Ahy19g1381 651 PANTHER KELCH REPEAT DOMAIN 8 647 - -
Ahy19g1381 651 SUPERFAMILY Kelch motif 25 226 IPR015915 GO:0005515
Ahy19g1381 651 Pfam Galactose oxidase, central domain 43 90 - -
Ahy19g1381 651 MobiDBLite consensus disorder prediction 610 630 - -
Ahy19g1381 651 Pfam Galactose oxidase, central domain 132 174 - -
Ahy19g1381 651 Pfam Galactose oxidase, central domain 185 233 - -
Ahy19g1381 651 Pfam Galactose oxidase, central domain 236 283 - -
Ahy19g1381 651 Gene3D - 19 125 IPR015915 GO:0005515
Ahy19g1381 651 Gene3D - 126 347 IPR015915 GO:0005515
Ahy19g1381 651 MobiDBLite consensus disorder prediction 410 429 - -
Ahy19g1381 651 MobiDBLite consensus disorder prediction 611 630 - -
Ahy19g1381 651 MobiDBLite consensus disorder prediction 401 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1381 Ahy-Chr19 31165801 31170039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1381 20 329 Acyl Lipid Metabolism Gene Families AT3G05420 32.198 1.59e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1381 K20285 - gmx:100787222 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1381 19 31165801 31170039 Ahy19g1381 19 31165801 31170039 ECH
Ahy19g1381 19 31165801 31170039 Ahy9g1105 9 24827292 24831468 hybridization
Ahy16g0882 16 15833909 15837403 Ahy19g1381 19 31165801 31170039 PCT
Ahy6g0478 6 5816667 5820893 Ahy19g1381 19 31165801 31170039 PCT
Ahy19g1381 19 31165801 31170039 Ahy16g0882 16 15833909 15837403 PCT
Ahy19g1381 19 31165801 31170039 Ahy6g0478 6 5816667 5820893 PCT