Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2482 ATGTCTACGTTTTCTACTCTGAGGAGGCCCTCACTATTAATAACCCAACGCCTGCACCACTCTTCACAAACATGCACACCAATAATCCAACCCAATAATAATAATAATCAAAAGAAGAAGCTGGGTTGTTTGGGGATTGTGGTTGGAATTTTTGTGTGTTGTTCTTGTTCCTTCTTCATTCCCATCACTACCAACAACTCCAACTCCCCTTCATCTAGTCATGATGATGATGCAAACACTTCAACTTTTTCTTCACATTCTTTGTTTAGAAAACTCTCCCTTCCACAGAACAAACACAGGTTGCTCTTTGGAGATTTGTACAGGAGGAAAGTTTTCTTCAACTATGAGAAGCGCATGCGTTTGCATAGTCCTCCCGAGAAGGTATTTGAATACTTTGCATCATGCCGGAGTCCGGAAGGAGAGATGCTGATGGAGGCAGCAGACCTAATGAGAGCAGTGGTTCCGGTGTTCCCGCCGTCGGAGTCGAATCTTGTGAGGGAAGGATACTTGAAAGGTGAAAGAAGAAGTCCAGGCCACCTTCGTTGTCCCCCTTCTCTGTTTTTCATGCTCTTTGATGTCAACAATGATGGCCTTATATCTTTCAACGTGTATATCTTTTTGGTAACACTACTTAGCATACCAGAATCAAGTTTTTCTGCGGCATTTAAAATGTTTGACATGGATAATGATGGGGAGATTGATAAGGAAGAATTCAAGAAAGTGATGGCATTGATGCGATCTCATAATAATTATAGACAAGGTGCTCATCACCATAGGGATGGAATGAGAAAAGGCTCAAAGGTCAATGATGATTATGTAGAAAATGGAGGTGTTTTGGAATATTTTTTTGGCATAGATGGAAAGGGACGCCTTAGCATTCATAGATTCTTGCAATTTATGAGAGACTTGCATCATGAAATACTAAGGCTGGAGTTTGATCATTATGACTACAAATCAAGAGAAACCATATCTGCCAAGGACTTTGCTCTCTCAATAGTTGCATCTGCTGATCTGAGTCATCTGGAGCTAAGGAAAAAATTGCTTCCATTTTCATTGGCCATTATTGGTTTTGCAAAAGTGAATGGCTTGTTAAGAAGAGAAGATTTTCAGCGAGCTGCATCACATGTTTGTGGATTATCACTTTCTGATAACGTGGTTAAGATTGTTTACCATTTGTTTGACACAAATGGGGATGGACACTTAAGTTCAGATGAGTTTGTAAGAGTGCTACACAACAAAGAAAATGATATCACTCAACCTATGGAGACAGGGATCTTGCGTTTCTTGTCTTGCTGTTGGAACTGTAAGCATAGCTTCCCATACTCGCGGTTGTTTTCTTAG 1341 0.4042 MSTFSTLRRPSLLITQRLHHSSQTCTPIIQPNNNNNQKKKLGCLGIVVGIFVCCSCSFFIPITTNNSNSPSSSHDDDANTSTFSSHSLFRKLSLPQNKHRLLFGDLYRRKVFFNYEKRMRLHSPPEKVFEYFASCRSPEGEMLMEAADLMRAVVPVFPPSESNLVREGYLKGERRSPGHLRCPPSLFFMLFDVNNDGLISFNVYIFLVTLLSIPESSFSAAFKMFDMDNDGEIDKEEFKKVMALMRSHNNYRQGAHHHRDGMRKGSKVNDDYVENGGVLEYFFGIDGKGRLSIHRFLQFMRDLHHEILRLEFDHYDYKSRETISAKDFALSIVASADLSHLELRKKLLPFSLAIIGFAKVNGLLRREDFQRAASHVCGLSLSDNVVKIVYHLFDTNGDGHLSSDEFVRVLHNKENDITQPMETGILRFLSCCWNCKHSFPYSRLFS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2482 446 Gene3D - 304 423 - -
Ahy8g2482 446 Pfam EF hand 219 244 IPR002048 GO:0005509
Ahy8g2482 446 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 15 342 IPR039800 GO:0005509|GO:0006851
Ahy8g2482 446 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 342 445 IPR039800 GO:0005509|GO:0006851
Ahy8g2482 446 CDD EFh_MICU 218 412 - -
Ahy8g2482 446 Gene3D - 123 303 - -
Ahy8g2482 446 PANTHER CALCIUM UPTAKE PROTEIN, MITOCHONDRIAL 15 342 - -
Ahy8g2482 446 PANTHER CALCIUM UPTAKE PROTEIN, MITOCHONDRIAL 342 445 - -
Ahy8g2482 446 CDD EFh 188 243 IPR002048 GO:0005509
Ahy8g2482 446 ProSitePatterns EF-hand calcium-binding domain. 226 238 IPR018247 -
Ahy8g2482 446 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Ahy8g2482 446 Pfam EF-hand domain pair 366 410 IPR002048 GO:0005509
Ahy8g2482 446 SUPERFAMILY EF-hand 187 411 IPR011992 -
Ahy8g2482 446 ProSiteProfiles EF-hand calcium-binding domain profile. 213 248 IPR002048 GO:0005509
Ahy8g2482 446 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
Ahy8g2482 446 SMART efh_1 217 245 IPR002048 GO:0005509
Ahy8g2482 446 SMART efh_1 187 211 IPR002048 GO:0005509
Ahy8g2482 446 SMART efh_1 385 413 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2482 Ahy-Chr8 47556295 47561777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2482 87 378 EF-hand Containing Proteins AT4G32060 61.491 1.80e-126 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2482 K22827 - gmx:100786375 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2742 18 130927112 130931717 Ahy8g2482 8 47556295 47561777 hybridization
Ahy16g3159 16 147822922 147827174 Ahy8g2482 8 47556295 47561777 PCT
Ahy6g2458 6 109254967 109259068 Ahy8g2482 8 47556295 47561777 PCT
Ahy8g2482 8 47556295 47561777 Ahy16g3159 16 147822922 147827174 PCT
Ahy8g2482 8 47556295 47561777 Ahy6g2458 6 109254967 109259068 PCT