Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2518 ATGGCGAGGGGAAGCGAAAGTGTGGGTGAGGGCGTACCGAAAGAGATGAGCGAAGCACTGAGGCGCACGGTAGCCAGCCTGGAGAATCTGGAAGCAGAGCTGCCGAATATTCTTTCTCTCTCAAACCCTTTCATCCTCTCTAAAATGCCTCCTCTTCAACGCGCTCACTCTCTCTTAACCCTTGCCAACATCACTTCCACCCTTTTCTCATTGAAGTTGAGATGCAAAGGGACTAATCCAGATTATCATCCCCTCAAATCTGAACTTGACAGGTTAAAAGTTTACCAACGCAAACTGGAACCCTTTGGGGATGTAGGTCAAGCTCTACCACCGCCTTCTTCTTTCTTGGATGAGCAGCCTTCTGTTGACCACTCCTTACGTGACCTCACTTCAGTACAAAGAAAAGAAATGGCTAACATGAGCATTGGGGAGGTACCAATGATGAGCAACTATCAGGAGCAGGCTGGTCAGAAGAGAAAGCATCCATCTTCTGAAGAACACCCTGTTCAAGTTGATGCTGAGGTGCACGTGAAGAAAGAACCACTTGAGGTTTTTGGTCATAACAATGGAAAAACTGAGGAACCAATAGTCATTGACATTTCAGATGATGACGAGTGA 618 0.4676 MARGSESVGEGVPKEMSEALRRTVASLENLEAELPNILSLSNPFILSKMPPLQRAHSLLTLANITSTLFSLKLRCKGTNPDYHPLKSELDRLKVYQRKLEPFGDVGQALPPPSSFLDEQPSVDHSLRDLTSVQRKEMANMSIGEVPMMSNYQEQAGQKRKHPSSEEHPVQVDAEVHVKKEPLEVFGHNNGKTEEPIVIDISDDDE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2518 205 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 13 105 - -
Ahy6g2518 205 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 13 105 IPR011082 -
Ahy6g2518 205 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 126 205 - -
Ahy6g2518 205 MobiDBLite consensus disorder prediction 152 205 - -
Ahy6g2518 205 MobiDBLite consensus disorder prediction 158 187 - -
Ahy6g2518 205 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 126 205 IPR011082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2518 Ahy-Chr6 110178113 110181356 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2518 K12592 - gmx:100795174 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3213 16 148708465 148711582 Ahy6g2518 6 110178113 110181356 hybridization
Ahy6g2518 6 110178113 110181356 Ahy20g2092 20 117949983 117953424 PCT
Ahy6g2518 6 110178113 110181356 Ahy10g1645 10 95387318 95388913 PCT
Ahy20g2092 20 117949983 117953424 Ahy6g2518 6 110178113 110181356 PCT
Ahy10g1645 10 95387318 95388913 Ahy6g2518 6 110178113 110181356 PCT