Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1645 ATGGTGAAAGCAGCAAGTGAAAGTGCGAGCGGTGCAGTCCCTGAATCCGTCATTGATTCAGTGAACGACACTCTCTCAAACCTTCAAGAATTGAAGCAACACTTTCAGCAATTCATGCCTCTCTTCTCCGACCCTCAAGTCCTCTCTCAAATGCCCCCTCTCCACCGTGCTCACTCTTTCTTCCTCCTCAGCCAAATCACTTCTAATCTTCTCGCGTTGAATTTGAGGTGTAGCGGGGTTCACCCAGATGATCATCCTATTAAATCAGAGCTTGATAGAGTGAACTTATATCAAGACAAACTGGAACGTTTGCTAGATTTAATGCAAGCTCCACTTCGACCGTCTACCACCTTGAATTATCAGGCCGCTACGCGATTTATAGAACACTCTCTCCCCGACCTCACTCAAGAGCAGAGGCAAAATATGAGGAGCATAAGTAGAGGGGAGAGACATCAAGGGCGTGCTGGTCAAAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAAATGCCACCAAGGAATTCTTGGAGAAAGCAGCCCTTGAGCTTTTTGGTAATAATCCTGACAGTATTAAGGGACCATTACGATTTGACATGTCAGATGACGACAGCCATGATGATGACGACAACGACAATGAACAAACTGTAGCCTGA 657 0.4536 MVKAASESASGAVPESVIDSVNDTLSNLQELKQHFQQFMPLFSDPQVLSQMPPLHRAHSFFLLSQITSNLLALNLRCSGVHPDDHPIKSELDRVNLYQDKLERLLDLMQAPLRPSTTLNYQAATRFIEHSLPDLTQEQRQNMRSISRGERHQGRAGQKRKYQSSEKQSVQNATKEFLEKAALELFGNNPDSIKGPLRFDMSDDDSHDDDDNDNEQTVA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1645 218 MobiDBLite consensus disorder prediction 203 218 - -
Ahy10g1645 218 MobiDBLite consensus disorder prediction 131 172 - -
Ahy10g1645 218 MobiDBLite consensus disorder prediction 143 161 - -
Ahy10g1645 218 MobiDBLite consensus disorder prediction 186 218 - -
Ahy10g1645 218 Pfam Sas10/Utp3/C1D family 18 100 IPR007146 -
Ahy10g1645 218 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 8 203 - -
Ahy10g1645 218 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 203 IPR011082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1645 Ahy-Chr10 95387318 95388913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1645 K12592 - gmx:100795174 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2092 20 117949983 117953424 Ahy10g1645 10 95387318 95388913 hybridization
Ahy16g3213 16 148708465 148711582 Ahy10g1645 10 95387318 95388913 PCT
Ahy6g2518 6 110178113 110181356 Ahy10g1645 10 95387318 95388913 PCT
Ahy10g1645 10 95387318 95388913 Ahy16g3213 16 148708465 148711582 PCT
Ahy10g1645 10 95387318 95388913 Ahy6g2518 6 110178113 110181356 PCT