Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3213 ATGGCGAGGGGAAGCGAAAGTGTGGGTGAGGGCGTACCGAAAGAGATGAGCGAAGCACTGAGGCGCACGGTAGCCAGCCTGGAGAATCTGGAAGCAGAGTTGCCGAATATTCTGTCTCTCTCAAACCCTTTCATCCTCTCTAAAATGCCTCCTCTTCAACGCGCTCACTCTCTCTTAACCCTTGCCAACATCACTTCCACCCTTTTCTCATTGAAGTTGAGATGCAAAGGGACTAATCCAGATTATCATCCCCTCAAATCTGAACTTGACAGGTTAAAAGTTTACCAACGCAAACTGGAACCCTTTGGGGATGTAGGTCAAGCTCTACCACTGCCTTCTTCTTTCTTGGATGAGCAGGCTTCTGTTGACCACTCCTTAAGTGACCTCACTTCAGTACAAAGAAAAGAAATGGCTAACATGAGCATTGAGGAGGTACCAACGATGAGCAACTATCAGGAGCAGGCTGGTCAGAAGAGAAAGCATCCATTTTCTGAAGAACACCCTATTCAAGTTGATGCTGAGGTGCACGTGAAGAAAGAACCACTTGAGGTTTTTGGTCATAACAATGGAAAAACTGAGGAACCAATAGTAATTGACATTTCAGATGATGACGAGTGA 618 0.4595 MARGSESVGEGVPKEMSEALRRTVASLENLEAELPNILSLSNPFILSKMPPLQRAHSLLTLANITSTLFSLKLRCKGTNPDYHPLKSELDRLKVYQRKLEPFGDVGQALPLPSSFLDEQASVDHSLSDLTSVQRKEMANMSIEEVPTMSNYQEQAGQKRKHPFSEEHPIQVDAEVHVKKEPLEVFGHNNGKTEEPIVIDISDDDE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3213 205 MobiDBLite consensus disorder prediction 182 205 - -
Ahy16g3213 205 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 13 105 - -
Ahy16g3213 205 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 125 205 - -
Ahy16g3213 205 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 125 205 IPR011082 -
Ahy16g3213 205 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 13 105 IPR011082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3213 Ahy-Chr16 148708465 148711582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3213 K12592 - gmx:100500667 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3213 16 148708465 148711582 Ahy16g3213 16 148708465 148711582 ECH
Ahy16g3213 16 148708465 148711582 Ahy6g2518 6 110178113 110181356 hybridization
Ahy16g3213 16 148708465 148711582 Ahy20g2092 20 117949983 117953424 PCT
Ahy16g3213 16 148708465 148711582 Ahy10g1645 10 95387318 95388913 PCT
Ahy20g2092 20 117949983 117953424 Ahy16g3213 16 148708465 148711582 PCT
Ahy10g1645 10 95387318 95388913 Ahy16g3213 16 148708465 148711582 PCT