Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2092 ATGGTGAAAGCAGCAAGTGAAAGTGCGAGCGGTGCAGTCCCTGAATCCGTCATTGATTCAGTGAACGAGACTCTCTCAAACCTTCAAGAATTGAAGCAACACTTTCAGCAATTCATGCCTCTCTTCTCCGACCCTCAAGTCCTCTCTCAAATGCCCCCTCTCCACCGTGCTCACTCTTTCTTCCTCCTCAGCCAAATCACTTCTAATCTTCTCGCGTTGAATTTGAGGTGTAGCGGGGTTCACCCAGATGATCATCCTATTAAATCAGAGCTTGATAGAGTGAACTTATATCAAGACAAACTGGAACGTTTGCTAGATTTAATGCAAGCTCCACTTCGACCGTCTACCACCTTGAATTATCAGGCCGCTACGCGATTTATAGAACACTCTCTCCCCGACCTCACTCAAGAGCAGAGGCAAAATATGAGGAGCATAAGTAGAGGGGAGAGACGTCAAGGGTGTGCTGGTCAAAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAAATGCCACCAAGGAATTCTTGGAGAAAGCAGCCCTTGAGCTTTTTGGTAATAATCCTGACAGTATTAAGGGACCATTACGATTTGACATGTCAGATGACGACAGCCATGATGATGACGACAACGACAATGAACAAACTGTAGCCTGA 657 0.4536 MVKAASESASGAVPESVIDSVNETLSNLQELKQHFQQFMPLFSDPQVLSQMPPLHRAHSFFLLSQITSNLLALNLRCSGVHPDDHPIKSELDRVNLYQDKLERLLDLMQAPLRPSTTLNYQAATRFIEHSLPDLTQEQRQNMRSISRGERRQGCAGQKRKYQSSEKQSVQNATKEFLEKAALELFGNNPDSIKGPLRFDMSDDDSHDDDDNDNEQTVA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2092 218 MobiDBLite consensus disorder prediction 203 218 - -
Ahy20g2092 218 Pfam Sas10/Utp3/C1D family 18 100 IPR007146 -
Ahy20g2092 218 MobiDBLite consensus disorder prediction 131 172 - -
Ahy20g2092 218 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 8 203 - -
Ahy20g2092 218 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 203 IPR011082 -
Ahy20g2092 218 MobiDBLite consensus disorder prediction 186 218 - -
Ahy20g2092 218 MobiDBLite consensus disorder prediction 157 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2092 Ahy-Chr20 117949983 117953424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2092 K12592 - gmx:100795174 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2092 20 117949983 117953424 Ahy20g2092 20 117949983 117953424 ECH
Ahy20g2092 20 117949983 117953424 Ahy10g1645 10 95387318 95388913 hybridization
Ahy16g3213 16 148708465 148711582 Ahy20g2092 20 117949983 117953424 PCT
Ahy6g2518 6 110178113 110181356 Ahy20g2092 20 117949983 117953424 PCT
Ahy20g2092 20 117949983 117953424 Ahy16g3213 16 148708465 148711582 PCT
Ahy20g2092 20 117949983 117953424 Ahy6g2518 6 110178113 110181356 PCT