Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2160 ATGGTTCTAGGCTCAAAAGGGAAGAACCGGAGAGGTGGCACCGTGCAAATCGATTGCCTTGTTCACATTCAAGAGATTAAGCCATGGCCCCCATCACAATCTCTCAAGTCCCTTCGTTCTGTGTTGATACAATGGGAGAACGGCGAGCGCTCTTCAGGGTCTACCAGTCCTGTTTCCCCAGGTGAAGGGAAAATTGAGTTTAATGAGTCATTTAGGCTTCATGTGACTCTGTTGAAGGACATGTCTGCCAAGCATAGTGTTGCTGATGTGTTCCAAAAGAATTACTTGGAGTTCAATTTGTATGAGCCTCGAAGAGATAAGATTGTTAAAGGTCAGTTGCTAGGAACTGCCATTGTAGACTTGGCAGATTGTGGCGTTCTTAAGGAGCCCTTGAGTGTTAGTGTTCCATTGAACTGCAAGAGGAACTACAGAAACACGGATCAGCCGCTTTTGTATGTTAAAATCGAGCCTACCGAAAAGCATCGGACTAGGTCCTCGTTCAAGGAAAGCAATCCCAAAGAGGCATCGAAGGACAACAAAGGTGGTGACTCTGTGTCTACATTGATGAATGAAGAATATGCTGAGGAAGCTGAGAGTGCTTCCTTTACTGATGATGATGTTTCCTCCCATTCATCTATTGTAGCAGCTACTACCCCAGAAACTAGTGGGAGTATACCTCCTCATTGTGCAGAGAATGGAGCACATGGAGCAACCCGAAACAAAGATAGTAATGAAAAGGAGCATACTTTGGCATCAGAAACAAAGGTTGAAAGATTGCAACAAGATACATGTGAGAAACTAGAGAGTTCATCTAATGCATCATCCGGAGATCTGTCCTCTAATATCGAAAGCCCGGCAAATGGTCAACCAGCTATGGAGAATACTAGTAATCACAGCCCAGTGACAATTCAAAAGCAAGTTGTTGATTCTTCCTCCCCATCCTTGGAGGAAAATTCCAAGAGCAGGTTCACAAACAGTGATCATGAAAATTTGGATCAGGAGGATTTTGAAGAGGATGCTAATTGTAGAAATAAATTTGAAGATGTTAAAACTAACAGTAATGGAAGTACTATTGATATCTATTCAAGGAACACTACATCTCTTAGTAATGGCTTTGTGGACATGACTCCAGGCTCTGTAAACTGTATTAGTTCAGAAATCAATGACAAATTGAATGAGCTGCATGGTGAAGCTGACGAATCTCACATGAAGGGGGAAGGAAGTGCTAAATCTTATTGTAGTTCTGTTGAGGACAGTAATGGAAATGAAATGTCTGATTTGGATATGCAAAACCATGTAGGAAATGAATCAATGGCTCATGGTGTGAAAGACCAAGTTTCATTAAGTAGCGATTTATACTATCTTGGTGGGTCAGAGAGTCATCTGAAAGGCAGTAATATTATGAGAAGTGAGAGATTAAAGCACGTGAAGTCGGTGAGGTCATCAACAGAATCAGCTAGGAGTATTGGATCACTCAGTAGCAATCATCTTTCTGAAGTAAGAGAAAGCCATATAGGAGATGCACAAAACAATGGAGGGAACATCCATGACAAAAGAGATGCTAAGATTTATCCAAGGGAATCCAGATCGACCATTTTTGACAGCAAGGTTGAGAATTTGGAAAACAAGATTAAGATGCTTGAGGGAGAGTTAAGAGAGGCTGCTGCCATTGAAGCTGCTTTATATTCAGTAGTTGCTGAGCATGGCAGCTCCATCAGTAAGGTTCATGCCCCAGCTCGGCGCCTGTCCAGGATGTACCTTCATGCTTGTAAAGAAAATATTCAAGCAAGAAGGTCTGGGGCTGCTAAAAGTGCTGTTTCAGGTTTAGCACTTGTTGCAAAAGCTTGTGGAAATGATGTCCCAAGATTGACATTTTGGTTATCTAATTCTATTGTGTTGAGAATAATTATAAGCCAATCCACCAGAGACATGGCACCATCAAGTCCTACCGGTTATAGTATGAGAAGGAAGAGAGCAGAGGGGAATGGAAAAATAGCTCAACCATTGGTATGGAAAGGTCTATCTGCTAGGAAAAGTGAGAAGACAGCATATGGTGCTTTTGGCAGCTGGGATGACCCAAATGTATTCATCTCAGCACTAGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCAATATGGTGGCAGTCTTTGACTCCGCATATGCAGCTTGCTGATGCGAAGTTCATCAGCAGGAATGACAGTTCTGCATCAAAGAAAAGCTTTAGAAGAATGTCTACCACATGTGACAAAGAGCAAGGGGATTTATCACTTGACATTTGGAAGAATGCTTTTAGAGAAGCCTGTGATAGGATCTGTCCCATTCGAGCTGGAGGGCATGAATGTGGCTGTTTGTCTCTTCTTCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTTGCAATGTTCAATGCCATCCTTCGTGAATCTGCTGACGACATCCCAACAGATCCTGTATCTGATCCCATTGGTGATCCTAAGGTCCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTGAAAACGGCGATTGGAAACTGGTCTAGATGGCTGACTGATCTATTTGGTATCGATGATGATGACGCGCTTGAAGATAAAGATGATGATGACCATTACAGCAGTGATGGAAGTCAAAATACATCATTCAAGGCCTTCCATCTTCTCAATGCACTAAGTGACCTCATGATGCTCCCTAAGGATATGCTGTTAAACGAATCCATCAGGAAAGAGGTGTGTCCCATGTTTAGTGCACCACTTATCAAGAAGATTCTGGAGAATTTTGTCCCGGATGAATTTTGCCCCGATCCAATTCCACCTGTTGTCTTTGAAGCTCTGGACTCACAGGATGATCTCGAAGATGGAAATGAGTCTGTCAACTACTATCCATGCATTGCAGCTCCAATCGCATATTCACCTCCCCCTGCAACTTCCATTGCAAGCATTACCGCGGAAGTTGGAAGCGAATCTTACCTGAGAAGAAGTAAATCTTCCGTTATCAGGAAGTCATACACAAGTGACGATGAACTCGATGAATTAAGCTCTCCATTATCTTCTATATTATTTAATGGTTCTTCCTCCTCTCCAGCATCAGTAAAACCCAACTGGAAGTTGAAGGATTGTCGCATTGAATCCAATGTCAGATATGAATTGCTCAGGGATGTCTGGACGAATAGCGAGTAA 3204 0.427 MVLGSKGKNRRGGTVQIDCLVHIQEIKPWPPSQSLKSLRSVLIQWENGERSSGSTSPVSPGEGKIEFNESFRLHVTLLKDMSAKHSVADVFQKNYLEFNLYEPRRDKIVKGQLLGTAIVDLADCGVLKEPLSVSVPLNCKRNYRNTDQPLLYVKIEPTEKHRTRSSFKESNPKEASKDNKGGDSVSTLMNEEYAEEAESASFTDDDVSSHSSIVAATTPETSGSIPPHCAENGAHGATRNKDSNEKEHTLASETKVERLQQDTCEKLESSSNASSGDLSSNIESPANGQPAMENTSNHSPVTIQKQVVDSSSPSLEENSKSRFTNSDHENLDQEDFEEDANCRNKFEDVKTNSNGSTIDIYSRNTTSLSNGFVDMTPGSVNCISSEINDKLNELHGEADESHMKGEGSAKSYCSSVEDSNGNEMSDLDMQNHVGNESMAHGVKDQVSLSSDLYYLGGSESHLKGSNIMRSERLKHVKSVRSSTESARSIGSLSSNHLSEVRESHIGDAQNNGGNIHDKRDAKIYPRESRSTIFDSKVENLENKIKMLEGELREAAAIEAALYSVVAEHGSSISKVHAPARRLSRMYLHACKENIQARRSGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRIIISQSTRDMAPSSPTGYSMRRKRAEGNGKIAQPLVWKGLSARKSEKTAYGAFGSWDDPNVFISALEKVEAWIFSRIVESIWWQSLTPHMQLADAKFISRNDSSASKKSFRRMSTTCDKEQGDLSLDIWKNAFREACDRICPIRAGGHECGCLSLLPRLIMEQCVARLDVAMFNAILRESADDIPTDPVSDPIGDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGIDDDDALEDKDDDDHYSSDGSQNTSFKAFHLLNALSDLMMLPKDMLLNESIRKEVCPMFSAPLIKKILENFVPDEFCPDPIPPVVFEALDSQDDLEDGNESVNYYPCIAAPIAYSPPPATSIASITAEVGSESYLRRSKSSVIRKSYTSDDELDELSSPLSSILFNGSSSSPASVKPNWKLKDCRIESNVRYELLRDVWTNSE* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 217 339 - -
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 412 429 - -
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 154 185 - -
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 154 180 - -
Ahy6g2160 1067 ProSiteProfiles C2 NT-type domain profile. 7 159 IPR019448 -
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 397 429 - -
Ahy6g2160 1067 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1067 IPR021827 GO:0005643
Ahy6g2160 1067 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1067 - -
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 238 264 - -
Ahy6g2160 1067 MobiDBLite consensus disorder prediction 265 320 - -
Ahy6g2160 1067 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 138 IPR019448 -
Ahy6g2160 1067 Coils Coil 537 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2160 Ahy-Chr6 103206491 103214726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2160 - - gmx:100783487 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2517 16 134820762 134828662 Ahy6g2160 6 103206491 103214726 hybridization
Ahy6g2160 6 103206491 103214726 Ahy20g2954 20 140336814 140343156 PCT
Ahy6g2160 6 103206491 103214726 Ahy10g2401 10 113586783 113590882 PCT
Ahy20g2954 20 140336814 140343156 Ahy6g2160 6 103206491 103214726 PCT
Ahy10g2401 10 113586783 113590882 Ahy6g2160 6 103206491 103214726 PCT