Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2401 ATGAACTGCAAGAGGAGCTACAGAAACACAGATCCGCCATTGCTGTTTATTAAGATTCAGCGAGTAGAAAAGAGTCGCGGTAGCTCTTCCTTGAAGGACAGGTTTTCTACAGAGGATTGCAAGGAAAGAAACAATAGTAATGGTGGAGGCTCTGTTTCGGATTTGATCAGTGAAGAATATGCTGAGGAAGCTGAGATTGCTTCTTTCACTGATGATGATGACGATGAACACTCCTCACATTCATCGGAAAAGAATGGGGCAGATAGACAAATTTACAATACAAGTATGTATGAGAAGAAGAATTCCTTGGCTTCTGATGCTTCCATATCTCACTCTCTTAACCTTAATTCACTATCAACTCAAGAACGTGTTCTGGCACGTGCTGATTCAGATTCTTCATCCTCATCTTTAGTTTTTAGTTTTGATCTGAATTCTAAAAGCAGGACAAGAAACAGTGAAAATGAAAATTTGGATCAGAATGTTCATGAAAAGGTGGCTGCAGATGTTCAAAGGAAGAGCAAAGAAAATGCTTCTATCATTATTAATTCAGGGAACACATTATCTCAAAGTAGTAGTGTTTACAAAGGCGAGAATCCTAGCTACGAAAACTGTGATAATTGTGAAAGCAATGAGAAATTAAATGGGAGATATGAGAAAGGAGATGAACAATTGGTAGCACAAGGTCCCAAAGATCAAGTCTCATTTGATAGTACTAAGGATTCTACTGACAGACTAAAGATCTTGCAGCTTGCGCAATCCCCGGCAGACTCGGCTTGGAAAACTGGATTGTTTGGTACAAATCACTATGTTGAAGTAAAGGAAAATGGTGGTCTTGGAGATTCAAGAAATAATGGAGGGAATGTCCGAAAGGTTTATCCAAAAGCAACAAGAAATGGTTGTTTAGATGGAAAAATGGAGCACTTGGAAATGAAGATAAAGAAGCTTGAAGGAGAGTTAAGAGAAGCAGCTGCTATTGAGGCTGCTTTGTATTCAGTGGTTGCTGAGCATGGAAACTCCATGAGTAAGGTCCATGCGCCGGCTCGGCGCCTTTCCAGGCTGTATCTTCATGCTTGCAAAGAAAATATTCAAGGAACAAGATCTGGTGCTGCTAAAAGTTCTGTTTCTGGATTAGTACTTGTTGTGAAGGCTTGTGGAAATGATGTCCCAAGATCTTTCTTAATGCTGCAATGCTTGACTCTGACTCCACATATGCAACCTATTGCTGCAAAATTGGCACAAAAGGAAGTGAATTCTGCCTCAAGAAAAAACAAGAGAGGAAAATCTAACTCATATGAGAAAGAGAAAGGGGAGGGGAACTTGCCACTTGATATTTGGAAGAAAGCATTCAAGGAAACCTGTGAAAGGCTCTGTCCTATTCGATCTGCAGGGCATGAGTGTGGTTGTTTGCCTATAATCCGTAGATTGATAATGGAGCAATGCGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGCAAGTCTTATGATGAAATCCCAACTGATCCTCTATCGGATCCCATTACTGATCCAAAGGTTCTTCCCATTCCACCTGGGAAATCAAGCTTTGGAGCTGGTGCACACTTAAAAACTGTGATTGGGACATGGTCTAGATGGTTGACTGACCTATTCGGCATGGATGACGACGACGACGATTCAGTAAAGGAAAAAGATGACAATGAAAAGAATAATGAGAGACAAATTACATCTTTCAAGTCCTTCAATCTTCTTAATGCACTTAGTGACCTTCTAATGCTTCCTAAGGACATGTTGTTAAGTGCATCAGTTAGGAAAGAGGTATGCCCAATGTTTAGTGCAACACTTATTAAGAAGATTCTAGACAGTTTTGTGCCAGATGAGTTTTGCACTGATCCAGTTCCCCCTACTGTTTTTGATGCTCTGAATTCAGAGAGTGATACACAGGAAGGAAACGAATCTGTCCTAAACTACCCATGCATTGCAGCTCCAATTATATATTTGCCTCCACCGGCAACTTCCATTGCAAGAATTGTTGGGCACTTTGGAAACAAATCTCAGTTGAGAAGAAGTAGATCTTGTGTTCTAAGTAAATCAAACACCAGTGACGATGAGCTCGACGAATTGAAATGCCCACTATCCTCAATATTCTTCTTCAGTGGTTCCTTGTCCTCATCACAAGTTTCAGCTAAACCGAACTTGAAGTCAAAAGATGAATCTCCAGTTAGATATGAACTCCTCAGGGATATTTGGTTGAATAGTGAATAA 2247 0.4032 MNCKRSYRNTDPPLLFIKIQRVEKSRGSSSLKDRFSTEDCKERNNSNGGGSVSDLISEEYAEEAEIASFTDDDDDEHSSHSSEKNGADRQIYNTSMYEKKNSLASDASISHSLNLNSLSTQERVLARADSDSSSSSLVFSFDLNSKSRTRNSENENLDQNVHEKVAADVQRKSKENASIIINSGNTLSQSSSVYKGENPSYENCDNCESNEKLNGRYEKGDEQLVAQGPKDQVSFDSTKDSTDRLKILQLAQSPADSAWKTGLFGTNHYVEVKENGGLGDSRNNGGNVRKVYPKATRNGCLDGKMEHLEMKIKKLEGELREAAAIEAALYSVVAEHGNSMSKVHAPARRLSRLYLHACKENIQGTRSGAAKSSVSGLVLVVKACGNDVPRSFLMLQCLTLTPHMQPIAAKLAQKEVNSASRKNKRGKSNSYEKEKGEGNLPLDIWKKAFKETCERLCPIRSAGHECGCLPIIRRLIMEQCVARLDVAMFNAILRKSYDEIPTDPLSDPITDPKVLPIPPGKSSFGAGAHLKTVIGTWSRWLTDLFGMDDDDDDSVKEKDDNEKNNERQITSFKSFNLLNALSDLLMLPKDMLLSASVRKEVCPMFSATLIKKILDSFVPDEFCTDPVPPTVFDALNSESDTQEGNESVLNYPCIAAPIIYLPPPATSIARIVGHFGNKSQLRRSRSCVLSKSNTSDDELDELKCPLSSIFFFSGSLSSSQVSAKPNLKSKDESPVRYELLRDIWLNSE* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2401 748 Coils Coil 298 325 - -
Ahy10g2401 748 MobiDBLite consensus disorder prediction 417 435 - -
Ahy10g2401 748 MobiDBLite consensus disorder prediction 415 435 - -
Ahy10g2401 748 MobiDBLite consensus disorder prediction 23 91 - -
Ahy10g2401 748 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 393 IPR021827 GO:0005643
Ahy10g2401 748 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 399 748 IPR021827 GO:0005643
Ahy10g2401 748 MobiDBLite consensus disorder prediction 25 41 - -
Ahy10g2401 748 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 393 - -
Ahy10g2401 748 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 399 748 - -
Ahy10g2401 748 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2401 Ahy-Chr10 113586783 113590882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2401 - - ahf:112718005 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2954 20 140336814 140343156 Ahy10g2401 10 113586783 113590882 hybridization
Ahy16g2517 16 134820762 134828662 Ahy10g2401 10 113586783 113590882 PCT
Ahy6g2160 6 103206491 103214726 Ahy10g2401 10 113586783 113590882 PCT
Ahy10g2401 10 113586783 113590882 Ahy16g2517 16 134820762 134828662 PCT
Ahy10g2401 10 113586783 113590882 Ahy6g2160 6 103206491 103214726 PCT