Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2517 ATGGTTCTAGGCTCAAAAGGGAAGAACCGGAGAGGTGGCACCGTGCAAATGGATTGCCTTGTTCACATTCAAGAGATTAAGCCATGGCCCCCATCACAATCTCTCAAGTCCCTTCGTTCTGTGTTGATACAATGGGAGAACGGCGAGCGCTCTTCAGGGTCTACCAGTCCTGTTTCCCCAGGTGAAGGGAAAATTGAGTTTAATGAGTCATTTAGGCTTCATGTGACTCTGTTGAAGGACATGTCTGCCAAGCATAGTGTTGCTGATGTGTTTCAAAAGAATTACTTGGAGTTCAATTTGTATGAGCCTCGAAGAGATAAGATTGTTAAAGGTCAGTTGCTAGGAACTGCCATTATAGACTTGGCGGATTGTGGCGTCCTTAAGGAGCCCTTGAGTGTTAGTGTTCCATTGAACTGCAAGAGGAACTACAGAAACACGGATCAGCCGCTTTTGTATGTTAAAATCGAGCCTACCGAAAAGCATCGGACTAGGTCCTCGTTCAAGGAAAGCAATCCCAAAGAGGCATCGAAGGACAACAAAGGTGGTGACTCTGTGTCTACATTGATGAATGAAGAATATGCTGAGGAAGCTGAGAGTGCTTCCTTTACTGATGATGATGTTTCCTCCCATTCATCTATTGTAGCAGCTACTACCCCGGAAACAAGTGGGAGTATACCTCCTCATTGTGCAGAGAATGGAGCACCTGGAGCAACCCGAAACACAGATAGTAATGAAAAGGAGCATACTTTGGCATCAGAAACAAAGGTTGAAAGATTGCAACAAGATACATGTGAGAAACTAGAGAGTTCATCTAACGCATCATCCGGAGATCTGTCCTCTAATATCGAAAGCCCGGCAAATGGTCAACCAGCTATGGAGAATACTAGTAATCACAGCCCAGTGACAATTCAAAAGCAAGTTGTTGATTCCTCCTCCCCATCCTTGGTGGAAAATTCCAAGAGCAGGTTCACAAACAGTGATCATGAAAATTTGGATCAGGAGGATTTTGAAGAGGATGCTAATTGTAGAAATAAATTTGAAGATGTTAAAACTAACAGTAATGGAAGTACTATTGATATCTATTCAAGGAACACTACATCTCTTAGTAATGGCTTTGTGGACATGACTCCAGGCTCTGTAAACTGTATTAGTTCAGAAATCGATGACAAATTGAATGAGCTGCATGGTGAAGCTGACGAATCTCACATGAAGGGGGAAGGAAGTGCTAAATCTTATTGTAGTTCTGTTGAGGATAGTAATGGAAATGAAATGTCTGATTTGGATATGCAAAACCATGTAGGAAATGAATCAATGGCTCGTGGTGTGAAAGACCAAGTTTCATTAAGTAGCGATATATACTATCTTGGTGGGTCAGAGAGTCATCTGAAAGGCAGTAATATTATGAGAAGTGAGAGATTAAAGCACGTGAAGTCGGTGAGGTCATCAACAGAATCAGCTAGGAGTATTGGATCACTCAGTAGCAATCATCTTTCTGAAGTAAGAGAAAGCCATATAGGAGATGCACAAAACAATGGAGGGAACATCCATGACAAAAGAGATGCTAAGATTTATCCAAGGGAATCCAGATCTACCATTTTTGACAGCAAGGTTGAGCATTTGGAAAACAAGATTAAGATGCTTGAGGGAGAGTTAAGAGAGGCTGCTGCCATTGAAGCTGCTTTATATTCAGTAGTTGCTGAGCATGGCAGTTCCATCAGTAAGGTTCATGCCCCAGCTCGGCGCCTGTCCAGGATGTACCTTCATGCTTGTAAAGAAAATATTCAAGCAAGAAGGTCTGGGGCTGCTAAAAGTGCTGTTTCAGGTTTAGCACTTGTTGCAAAAGCTTGTGGAAATGATGTCCCAAGATTGACATTTTGGTTATCTAATTCTATTGTGTTGAGAATAATTATAAGCCAATCCACCAGAGACATGGCGCCATCAAGTCCTACCGGTTATAGTATGAGAAGGAAGAGAGCAGAGGGGAATGGAAAAATAGCTCAACCATTGGTATGGAAAGGTCTATCTGCTAGGAAAAGTGAGAAGACAGCATTTGGTGCTTTTGGCAGCTGGGATGACCCAAATGTATTCATCTCAGCACTAGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCAATATGGTGGCAGTCTTTGACTCCGCATATGCAGCTTGTTGATGCGAAGTTCATCAGCAGGAATGTCAGTTCTGCATCAAAGAAAAGCTTTAGAAGAATGTCTACCACATGTGACCAAGAGCAAGGGGATTTATCACTTGACATTTGGAAGAATGCTTTTAGAGAAGCCTGTGATAGGATCTGTCCCATTCGAGCTGGAGGGCATGAATGTGGCTGTTTGTCTCTTCTTCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTTGCAATGTTCAATGCCATCCTTCGTGAATCTGCTGATGACATCCCAACGGATCCTGTATCTGATCCCATTGGTGATCCTAAGGTCCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTGAAAACGGCGATTGGAAACTGGTCTAGATGGCTGACTGATCTATTTGGTATCGATGATGATGATGCGCTTGAAGATAAAGATGATGATGACCATTACAGCAGTGATGGAAGTCAAAATACATCATTCAAGGCCTTCCATCTTCTCAATGCACTGAGTGACCTCATGATGCTCCCTAAGGATATGCTGTTAAACGAATCCATCAGGAAAGAGGTGTGTCCCATGTTTAGTGCACCACTTATCAAGAAGATTCTGGAGAATTTTGTCCCGGATGAATTTTGCCCCGATCCAATTCCACCTGTTGTCTTTGAAGCTCTGGACTCACAGGATGATCTCGAAGATGGAAAGGAGTCTGTCAACTACTATCCATGCATTGCAGCTCCAATCGCATATTCACCTCCCCCTGCAACTTCCATTGCAAGCATTACGGCGGAAGTTGGAAGCGAATCTTACCTGAGAAGAAGTAAATCTTCCGTTATCAGGAAGTCATACACAAGTGACGATGAACTCGATGAATTAAGCTCTCCATTATCTTCTATATTATTTAATGGTTCCTCCTCTCCAGCATCAGTAAAACCCAACTGGAAGTTGAAGGATTGTCGCATTGAATCCAATGTCAGATATGAATTGCTCAGGGATGTCTGGAGGAATAGCGAGTAA 3201 0.4292 MVLGSKGKNRRGGTVQMDCLVHIQEIKPWPPSQSLKSLRSVLIQWENGERSSGSTSPVSPGEGKIEFNESFRLHVTLLKDMSAKHSVADVFQKNYLEFNLYEPRRDKIVKGQLLGTAIIDLADCGVLKEPLSVSVPLNCKRNYRNTDQPLLYVKIEPTEKHRTRSSFKESNPKEASKDNKGGDSVSTLMNEEYAEEAESASFTDDDVSSHSSIVAATTPETSGSIPPHCAENGAPGATRNTDSNEKEHTLASETKVERLQQDTCEKLESSSNASSGDLSSNIESPANGQPAMENTSNHSPVTIQKQVVDSSSPSLVENSKSRFTNSDHENLDQEDFEEDANCRNKFEDVKTNSNGSTIDIYSRNTTSLSNGFVDMTPGSVNCISSEIDDKLNELHGEADESHMKGEGSAKSYCSSVEDSNGNEMSDLDMQNHVGNESMARGVKDQVSLSSDIYYLGGSESHLKGSNIMRSERLKHVKSVRSSTESARSIGSLSSNHLSEVRESHIGDAQNNGGNIHDKRDAKIYPRESRSTIFDSKVEHLENKIKMLEGELREAAAIEAALYSVVAEHGSSISKVHAPARRLSRMYLHACKENIQARRSGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRIIISQSTRDMAPSSPTGYSMRRKRAEGNGKIAQPLVWKGLSARKSEKTAFGAFGSWDDPNVFISALEKVEAWIFSRIVESIWWQSLTPHMQLVDAKFISRNVSSASKKSFRRMSTTCDQEQGDLSLDIWKNAFREACDRICPIRAGGHECGCLSLLPRLIMEQCVARLDVAMFNAILRESADDIPTDPVSDPIGDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGIDDDDALEDKDDDDHYSSDGSQNTSFKAFHLLNALSDLMMLPKDMLLNESIRKEVCPMFSAPLIKKILENFVPDEFCPDPIPPVVFEALDSQDDLEDGKESVNYYPCIAAPIAYSPPPATSIASITAEVGSESYLRRSKSSVIRKSYTSDDELDELSSPLSSILFNGSSSPASVKPNWKLKDCRIESNVRYELLRDVWRNSE* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2517 1066 MobiDBLite consensus disorder prediction 217 339 - -
Ahy16g2517 1066 ProSiteProfiles C2 NT-type domain profile. 7 159 IPR019448 -
Ahy16g2517 1066 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1066 IPR021827 GO:0005643
Ahy16g2517 1066 MobiDBLite consensus disorder prediction 154 185 - -
Ahy16g2517 1066 MobiDBLite consensus disorder prediction 154 180 - -
Ahy16g2517 1066 MobiDBLite consensus disorder prediction 265 321 - -
Ahy16g2517 1066 MobiDBLite consensus disorder prediction 241 264 - -
Ahy16g2517 1066 MobiDBLite consensus disorder prediction 398 422 - -
Ahy16g2517 1066 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 17 138 IPR019448 -
Ahy16g2517 1066 Coils Coil 537 557 - -
Ahy16g2517 1066 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2517 Ahy-Chr16 134820762 134828662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2517 - - gmx:100783487 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2517 16 134820762 134828662 Ahy16g2517 16 134820762 134828662 ECH
Ahy16g2517 16 134820762 134828662 Ahy6g2160 6 103206491 103214726 hybridization
Ahy16g2517 16 134820762 134828662 Ahy20g2954 20 140336814 140343156 PCT
Ahy16g2517 16 134820762 134828662 Ahy10g2401 10 113586783 113590882 PCT
Ahy20g2954 20 140336814 140343156 Ahy16g2517 16 134820762 134828662 PCT
Ahy10g2401 10 113586783 113590882 Ahy16g2517 16 134820762 134828662 PCT