Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2954 ATGGTTCTAGGCATGAAAGCTAAGAACAGAAGAAGTGGAAACATTCAAATTGATTACCTCATTCATCTTAAGGAGATTAAGCCATGGCCTCCAACACAATCTCTAAGATCCCTTCGTTCCGTACTCATTCAGTGGAAGAATGGAGAATCTTCATCCGGTTGTACCAAACTCGTTTCTCCTTCACTCGGTTCCGTTATCGGCGAAGGCAAAATCGAATTCAACGAGTCGGTTAAGCTTTCTGTTACGTTGTTAAGGGACGTGGCTCTTAGAGGCGGTGATGCTGACGTGTTCCAGAAGAATCTCTTGGACCTGAACTTGTACGAACCGCGACGCGAAAAGTCACAGTTGTTGGCATCTGGAACCATAGACTTGGCAAATTTTGTGATGCATAAGGAGAGATTCGAAGTTACTGTGCCTATGAACTGCAAGAGGAGCTACAGAAACACAGATCCGCCATTGCTGTTTGTTAAGATTCAGCGAGTAGAAAAGAGTCGCGGTAGCTCTTCCTTGAAGGACAGGTTTTCTACAGAGGATTGCAAGGAAAGAAACAATAGTAATGGTGGAGGCTCTGTTTCGGATTTGATTAGTGAAGAATATGCCGAGGAAGCTGAGATTGCTTCTTTCACTGATGATGATGACGATGAACACTCCTCACATTCATCGGAAAAGAATGGGGCAGATAGACAAATTTACAATACAAGTATGTATGAGAAGAAGAATTCCTTGGCTTCTGATGCTTCCATATCTCACTCTCTTAACCTTAATTCACTATCAACTCAAGAACGTGTTCTGGCACGTGCTGATTCAGATTCTTCATCCTCATCTTTAGTTTTTAGTTTTGATCTGAATTCTAAAAGCAGGACAAGAAACAGTGAAAATGAAAATTTGGATCAGAATGTTCATGAAAAGGTAGCTGCAGGTGTTCAAAGGAAGAGCAAAGAAAATGCTTCTATCATTATTAATTCAGGGAACACATTATCTCAAAGTAGTAGTGTTTACAAAGGCGAGAATCCTAGCTATGAAAACTGTGATAATTGTGAAAGCAATGAGAAATTAAATGGGAGATATGAGAAAGGAGATGAACAATTGGTAGCACAAGGTCCCAAAGATCAAGTCTCATTTGATAGTACTAAGGATTCTACTGACAGACTAAAGATCTTGCAGCTTGCGCAATCGCCAGCAGACTCAGCTTGGAAAACTGGATTGTTTGGTACAAATCACTATGTTGAAGTAAAGGAAAATGGTGGTCTTGGAGATTCAAGAAATAATGGAGGGAATGTCCGAAAGGTTTATTCAAAAGCAACAAGAAATGGTGGTTTAGATGGAAAAATGGAGCACTTGGAAATGAAGATAAAGAAGCTTGAAGGAGAGTTAAGAGAAGCAGCTGCTATTGAGGCTGCTTTGTATTCAGTGGTTGCTGAGCATGGAAACTCCATGAGTAAGGTCCATGCGCCGGCTCGGCGCCTTTCCAGGCTGTATCTTCATGCTTGCAAAGAAAATATTCAAGGAACAAGATCTGGTGCTGCTAAAAGTTCTGTTTCTGGATTAGTACTTGTTGTGAAGGCTTGTGGAAATGATGTCCCAAGGTTAACATTTTGGTTGTCTAATACTATAGTGTTGAGAACAATTATAAACCAATCCATCAAAGATTCAGTTCAATCAAATAATTCTGGAGTTATCCGCGGAAGGAAATACAACGGTGACTTGTACGGCAAGATAACCTCCACGGCTGCAAGATTGAAGGGATACCACCCTGCAAAAAATGAACATAGAGCAATAGGCTATGCAAGTTTTGGTAACTGGGAGGATCCACAGGTGTTCATATCAGCACTGGAAAAAGTGGAAGTTTGGATCTTCTCTCGCATTGTTGAATCTATTTGGTGGCAGACTCTGACTCCACATATGCAACCTATTGCTGCAAAATTGGCACAAAAGGAAGTGAATTCTGCCTCAAGAAAAAACAAGAGAGGAAAATCTAACTCATATGAGAAAGAGAAAGGGGAGGGGAACTTGCCACTTGATATTTGGAAGAAAGCATTCAAGGAAACCTGTGAAAGGCTCTGTCCTATTCGATCTGCAGGGCATGAGTGTGGTTGTTTGCCTATAATCCATAGATTGATAATGGAGCAATGCGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGCAAGTCTTATGATGAAATCCCAACTGATCCTCTATCGGATCCCATTACTGATCCAAAGGTTCTTCCCATTCCACCTGGGAAATCAAGCTTTGGAGCTGGTGCACACTTAAAAACTGTGATTGGGACATGGTCTAGATGGTTGACTGACCTATTCGGCATGGATGATGACGACGACGATTCAGTAAAGGAAAAAGATGACAATGAAAAGAATAATGAGAGACAAATTACATCTTTCAAGTCCTTCAATCTTCTTAATGCACTTAGTGACCTTCTAATGCTTCCTAAGGACATGTTGTTAAGTGCATCAGTTAGGAAAGAGGTATGCCCAATGTTTAGTGCAACACTTATTAAGAAGATTCTAGACAGTTTTGTGCCAGATGAGTTTTGCACTGATCCAGTTCCCCCTACTGTTTTTGATGCTCTAAATTCAGAGAGTGATACACAGGAAGGAAACGAATCTGTCCTAAACTACCCATGCATTGCAGCTCCAATTATATATTTGCCTCCACCGGCAACTTCCATTGCAAGCATTGTTGGGGACTTTGGAAACAAATCTCAGTTGAGAAGAAGTAGATCTTGTGTTGTAAGTAAATCAAACACCAGTGACGATGAGCTCGAAGAATTGAAATGCCCACTATCCTCCATATTCTTCTTCAGTGGTTCCTTGTCCTCATCACAAGTTTCAGCTAAACCGAACTTGAAGTCAAAAGATGAATCTCCAGTTAGATATGAACTCCTCAGGGATATTTGGTTGAATAGTGAATAA 2940 0.4082 MVLGMKAKNRRSGNIQIDYLIHLKEIKPWPPTQSLRSLRSVLIQWKNGESSSGCTKLVSPSLGSVIGEGKIEFNESVKLSVTLLRDVALRGGDADVFQKNLLDLNLYEPRREKSQLLASGTIDLANFVMHKERFEVTVPMNCKRSYRNTDPPLLFVKIQRVEKSRGSSSLKDRFSTEDCKERNNSNGGGSVSDLISEEYAEEAEIASFTDDDDDEHSSHSSEKNGADRQIYNTSMYEKKNSLASDASISHSLNLNSLSTQERVLARADSDSSSSSLVFSFDLNSKSRTRNSENENLDQNVHEKVAAGVQRKSKENASIIINSGNTLSQSSSVYKGENPSYENCDNCESNEKLNGRYEKGDEQLVAQGPKDQVSFDSTKDSTDRLKILQLAQSPADSAWKTGLFGTNHYVEVKENGGLGDSRNNGGNVRKVYSKATRNGGLDGKMEHLEMKIKKLEGELREAAAIEAALYSVVAEHGNSMSKVHAPARRLSRLYLHACKENIQGTRSGAAKSSVSGLVLVVKACGNDVPRLTFWLSNTIVLRTIINQSIKDSVQSNNSGVIRGRKYNGDLYGKITSTAARLKGYHPAKNEHRAIGYASFGNWEDPQVFISALEKVEVWIFSRIVESIWWQTLTPHMQPIAAKLAQKEVNSASRKNKRGKSNSYEKEKGEGNLPLDIWKKAFKETCERLCPIRSAGHECGCLPIIHRLIMEQCVARLDVAMFNAILRKSYDEIPTDPLSDPITDPKVLPIPPGKSSFGAGAHLKTVIGTWSRWLTDLFGMDDDDDDSVKEKDDNEKNNERQITSFKSFNLLNALSDLLMLPKDMLLSASVRKEVCPMFSATLIKKILDSFVPDEFCTDPVPPTVFDALNSESDTQEGNESVLNYPCIAAPIIYLPPPATSIASIVGDFGNKSQLRRSRSCVVSKSNTSDDELEELKCPLSSIFFFSGSLSSSQVSAKPNLKSKDESPVRYELLRDIWLNSE* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2954 979 MobiDBLite consensus disorder prediction 167 192 - -
Ahy20g2954 979 MobiDBLite consensus disorder prediction 646 666 - -
Ahy20g2954 979 MobiDBLite consensus disorder prediction 648 666 - -
Ahy20g2954 979 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 979 IPR021827 GO:0005643
Ahy20g2954 979 ProSiteProfiles C2 NT-type domain profile. 7 162 IPR019448 -
Ahy20g2954 979 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 979 - -
Ahy20g2954 979 MobiDBLite consensus disorder prediction 207 230 - -
Ahy20g2954 979 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 142 IPR019448 -
Ahy20g2954 979 Coils Coil 437 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2954 Ahy-Chr20 140336814 140343156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2954 - - adu:107471584 1798.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2954 20 140336814 140343156 Ahy10g2401 10 113586783 113590882 hybridization
Ahy16g2517 16 134820762 134828662 Ahy20g2954 20 140336814 140343156 PCT
Ahy6g2160 6 103206491 103214726 Ahy20g2954 20 140336814 140343156 PCT
Ahy20g2954 20 140336814 140343156 Ahy16g2517 16 134820762 134828662 PCT
Ahy20g2954 20 140336814 140343156 Ahy6g2160 6 103206491 103214726 PCT