Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1934 ATGGCTTCTTTTCTTTCCTTATCTCTTCCGAAACTAAACTTGATAAAAGCCTCATCAACATCTGCTACTACTACTTCTACTAGTGTCTCCACTCCTGAGGCACTCAACGAGAAATTCGGCCGAAAAGGCATCAAGTTCTGTGAAGCTGACAGTGTCCCGGTTGTGGAGCTTTCGGTCCGAAATGGCAGCTCATTGAGCCTAAGGATACCTGATGCTCATGTGACATCTTACAGGCCACATGTTTATTGGAAAGATGATGGTTTTGAGGAGGTGCTTTATACAATTCCGGCTGCCGAAGCCGGCCTATACAAGGCCAAGGGTGGGATTGGTTTGATCTTGAATGAAACAGTGCAACCTGGAGGCAGACAGTTACTCCCTTCAACTTTAGAGTGGACTGTAAATGATGCTGACTTCGACGCCATTGATGCTGTCCAGGTTGAATTGAGCTGCACTAGTAGATTTTTGGACATCACATACGTTGTGAGCCTTTATCCAGTGAGCATGGCCACAGCAGTTATAGTGAAGAACAAAGCTCCTAAGGCTGTTACTCTAAACAATGCCATACTCAGCCACTTTAGATTCAAGACAAGAAATGGTGCAGCAATTCAAGGCCTTAGAGCCTGCTCATACTGTTTGCACCCTCCTCCGTCTTCGCCTTTTCAAATCCTGACTCCGGCTGATGCCACGAAATCCGAGCCTCCCGGATGGCTTTCCTTCGGCGCTGAGCCGGAACCAAAGCCGGGGACATGGGGTCAGCAAGACCTGACTTTTACACTTCTTGAGAATAAGATGAGTAGAGTCTATGCAGCACCTCCAAGTGAAAGATCAAAGCCATTTTACAATACTCCACCTTCCAAGTATGAAACCATTGATCAGGGACGAGAGCTTTGCTTCAGGGTAATAAGAATGGGATTTGAGGATATTTATGTATCAAGCCCTGGTTCATTGTCAGAGAAATATGGAAAAGACTACTTTATATGCACTGGCCCTGCTTCAATACTGGAGCCTGTGACTGTGAACCCTGGAGAAGAGTGGAGAGGAGCACAAGTTATTGAGCATGACAATCTCACTTAA 1074 0.46 MASFLSLSLPKLNLIKASSTSATTTSTSVSTPEALNEKFGRKGIKFCEADSVPVVELSVRNGSSLSLRIPDAHVTSYRPHVYWKDDGFEEVLYTIPAAEAGLYKAKGGIGLILNETVQPGGRQLLPSTLEWTVNDADFDAIDAVQVELSCTSRFLDITYVVSLYPVSMATAVIVKNKAPKAVTLNNAILSHFRFKTRNGAAIQGLRACSYCLHPPPSSPFQILTPADATKSEPPGWLSFGAEPEPKPGTWGQQDLTFTLLENKMSRVYAAPPSERSKPFYNTPPSKYETIDQGRELCFRVIRMGFEDIYVSSPGSLSEKYGKDYFICTGPASILEPVTVNPGEEWRGAQVIEHDNLT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1934 357 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 356 - -
Ahy6g1934 357 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 356 - -
Ahy6g1934 357 Gene3D - 52 357 IPR014718 GO:0030246
Ahy6g1934 357 SUPERFAMILY Galactose mutarotase-like 45 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1934 Ahy-Chr6 94618377 94620997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1934 - - gmx:100788455 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2263 16 125370904 125373267 Ahy6g1934 6 94618377 94620997 hybridization
Ahy6g1934 6 94618377 94620997 Ahy20g3048 20 141176082 141178835 PCT
Ahy6g1934 6 94618377 94620997 Ahy10g2485 10 114395081 114397769 PCT
Ahy20g3048 20 141176082 141178835 Ahy6g1934 6 94618377 94620997 PCT
Ahy10g2485 10 114395081 114397769 Ahy6g1934 6 94618377 94620997 PCT