Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2485 ATGGCTCTAATAACTTCCCCTTTACTCCCCACTCAATTCAATTCCAGCAGTAGCTTAGCTATAACTTGTGCTATTAACACACCTTCACACACTTACTTTAAATTTCCCTCAGGAAACCACACTTTCAACTGCTGCAAGCCATTAGCAGCAGTTGCTTCTTCAGTTCCATACCAACCCACCAACAACTTGGACTACCTTGAAAAAGAAGAGTTCATTGGACATGATGGAGTCACCTTTGAAGCAGTTGGCGATGGCTCCGTCGTTGCCAAGATGGAACTGAAAAACGGAAGCGTTGTGAGTATGTTGCTGCCCAGTGGGGTGATCACCTCCTACAAGGCTCCCATGTGGCATGGCGGCACGGTGGAGCTGCTGCACACTGCGGTGTCAGAGGGAGATCATGGTGCTGCCCTCATTCAAGGAGGGGTCTCTTCAAACTTCACTTTCACAACTGATGACTGCCAAGTTTCTTTCTCTCCAACTCATTGGGTTCTCAATAAAATTAAAAGCCACCCTGAGGAATCCATTAAGGTAGAATTAATTAATAAATCATCAGAGGACAAGATTGGAATTAAGTACATTGTAACTTTAGAAGAAGATGGGTTGCAGTCAGAGTTTGAAGTCCAAAACTCAATGCATTCACCCCTTCAGATAACAGGGTCTATCCTGAGCCATCTGACAGTGAGTTCACCAGAAGCAACCTATGCAGTTGGATTAGAAAGATCAAATTACTGGAGGAGGCCCCTTTTGGAATCAGAATTTATTTTGAGTCCTCCTCCGGATTCTAATTACCAAGAAGGGTTTGGAAAAATATGGAACATACCAGCACTTCAGCAACTAATTCCTCATTGGGGTGCAACAAAAGATCAGAACAAAGAAGATATGAGTGGTGAAGAAGAGGATGGGTATAAGAATTTACGAGACAAGATTAGTCTCATTTACACAGATGCCCCTCGTAGTATTACAGTTATAGATAGGGGTAGAAGAAACTCATTGTCAATTGGAAGAATCGGATTGGACGAGATGTACCTCTTCAGTCCTGGCTCAAAAGTTGAAATTTACAGCAAGTATTCTTACATATTGGTTGGCCAAACTGCCATTCTCAAACCAATAGTAGTAAATCCTCAAGATGTTTGGAACGGAGGGCAATACATACACAATCCAAATCTATAA 1170 0.4248 MALITSPLLPTQFNSSSSLAITCAINTPSHTYFKFPSGNHTFNCCKPLAAVASSVPYQPTNNLDYLEKEEFIGHDGVTFEAVGDGSVVAKMELKNGSVVSMLLPSGVITSYKAPMWHGGTVELLHTAVSEGDHGAALIQGGVSSNFTFTTDDCQVSFSPTHWVLNKIKSHPEESIKVELINKSSEDKIGIKYIVTLEEDGLQSEFEVQNSMHSPLQITGSILSHLTVSSPEATYAVGLERSNYWRRPLLESEFILSPPPDSNYQEGFGKIWNIPALQQLIPHWGATKDQNKEDMSGEEEDGYKNLRDKISLIYTDAPRSITVIDRGRRNSLSIGRIGLDEMYLFSPGSKVEIYSKYSYILVGQTAILKPIVVNPQDVWNGGQYIHNPNL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2485 389 Gene3D - 83 387 IPR014718 GO:0030246
Ahy10g2485 389 PANTHER PROTEIN NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 40 389 - -
Ahy10g2485 389 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 40 389 - -
Ahy10g2485 389 SUPERFAMILY Galactose mutarotase-like 106 383 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2485 Ahy-Chr10 114395081 114397769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2485 - - gmx:100775728 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3048 20 141176082 141178835 Ahy10g2485 10 114395081 114397769 hybridization
Ahy16g2263 16 125370904 125373267 Ahy10g2485 10 114395081 114397769 PCT
Ahy6g1934 6 94618377 94620997 Ahy10g2485 10 114395081 114397769 PCT
Ahy10g2485 10 114395081 114397769 Ahy16g2263 16 125370904 125373267 PCT
Ahy10g2485 10 114395081 114397769 Ahy6g1934 6 94618377 94620997 PCT