Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2263 ATGGCTTCTTTTCTTTCCTTATCTCTTCCGAAACTAAACTTGATAAAAGCCTCATCAACATCTGCTACTACTACTTCTACTAGTGTCTCCACTCCTGAGGCACTCAACGAGAAATTCGGGCGAAAAGGCATCAAGTTCTGTGAAGCTGACAGTGTCCCGGTTGTGGAGCTTTCGGTTCGAAATGGCAGCTCATTGAGCCTAAGGATACCTGATGCTCATGTGACATCTTACAGGCCACATGTTTATTGGAAAGATGATGGTTTTGAGGAGGTGCTTTATACAATTCCGGCTGCCGAAGCTGGCCTTTACAAGGCCAAGGGTGGGATTGGTTTGATCTTGAATGAAGCAGTGCAACCTGGAGGCAGACAGTTACTCCCTTCAACTTTAGAGTGGACTGTAAATGATGCTGACTTCGACGCCATTGATGCTGTCCAGGTTGAATTGAGCTGCACTAGTAGATTTTTGGACATCACATACGTTGTGAGCCTTTATCCAGTGAGCATGGCCACAGCAGTTATAGTGAAGAACAAAGCTCCTAAGGCTATTACTCTAAACAATGCCATACTCAGCCACTTGAGATTCAAGACAAGAAATGGTGCAGCAATTCAAGGCCTTAGAGCCTGCTCATACTGTTTGCACCCTCCTCCGTCTTCGCCTTTCCAAATCCTGACTCCGGCCGATGCCACGAAATACGAGCCTCCCGGATGGCTTTCCTTCGGCGCTGAGCCGGAACCAAAGCCGGGGACATGGGGTCAGCAAGACCTGACTTTTACACTTCTTGAGAATAAGATGAGTAGAGTCTATGCAGCACCTCCAAGTGAAAGATCAAAGCCATTTTACAATACTCCACCTTCCAAGTATGAAACCATTGATCAGGGACGAGAGCTTTGCTTCAGGGTAATAAGAATGGGATTTGAGGATATTTATGTATCAAGCCCTGGTTCATTGTCAGAGAAATATGGAAAAGACTACTTTATATGCACTGGCCCTGCTTCAATACTGGAGCCTGTGACTGTGAACCCTGGTGAAGAGTGGAGAGGAGCACAAGTTATTGAGCATGACAATCTCACTTAA 1074 0.46 MASFLSLSLPKLNLIKASSTSATTTSTSVSTPEALNEKFGRKGIKFCEADSVPVVELSVRNGSSLSLRIPDAHVTSYRPHVYWKDDGFEEVLYTIPAAEAGLYKAKGGIGLILNEAVQPGGRQLLPSTLEWTVNDADFDAIDAVQVELSCTSRFLDITYVVSLYPVSMATAVIVKNKAPKAITLNNAILSHLRFKTRNGAAIQGLRACSYCLHPPPSSPFQILTPADATKYEPPGWLSFGAEPEPKPGTWGQQDLTFTLLENKMSRVYAAPPSERSKPFYNTPPSKYETIDQGRELCFRVIRMGFEDIYVSSPGSLSEKYGKDYFICTGPASILEPVTVNPGEEWRGAQVIEHDNLT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2263 357 Gene3D - 50 357 IPR014718 GO:0030246
Ahy16g2263 357 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 356 - -
Ahy16g2263 357 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 356 - -
Ahy16g2263 357 SUPERFAMILY Galactose mutarotase-like 45 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2263 Ahy-Chr16 125370904 125373267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2263 - - gmx:100788455 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2263 16 125370904 125373267 Ahy16g2263 16 125370904 125373267 ECH
Ahy16g2263 16 125370904 125373267 Ahy6g1934 6 94618377 94620997 hybridization
Ahy16g2263 16 125370904 125373267 Ahy20g3048 20 141176082 141178835 PCT
Ahy16g2263 16 125370904 125373267 Ahy10g2485 10 114395081 114397769 PCT
Ahy20g3048 20 141176082 141178835 Ahy16g2263 16 125370904 125373267 PCT
Ahy10g2485 10 114395081 114397769 Ahy16g2263 16 125370904 125373267 PCT