Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3048 ATGTGTAATGAAAGACAAGCCAAAAGCATCGCTCTAATAACTTCCCTTTTACTCCCCACTCAATTCAATTCCAGCAGCTTAGCTATAACTTGTGCTATTAACACACCTTCACACACTTATTTTAAATTTCCCTCAGGAAACCACACTTTCAACTCCTGCAAGCCATTGGCAGCAGTTGCTTCTTCAGTTCCATACCAACCCACCAACAACTTGGACTACCTTGAAAAAGAAGAGTTCATTGGACATGATGGAGTCACCTTTGAAGCAGTCGGCGATGGCTCCGTCGTTGCCAAGATGGAACTGAAAAACGGAAGCGTTGTGAGCATGTTGCTGCCCAGTGGGGTGATCACCTCCTACAAGGCTCCCATGTGGCATGGCGGCACGGTGGAGCTGCTGCACACTGCGGTGTCAGAGGGAGATCATGGTGCTGCCCTCATTCAAGGAGGGATCTTTTCAAACTTCACTTTCACAACTGATGACTGCCAAGTTTCTTTCTCTCCAACTCATTGGGTCCTCAGTAAAATTAAAAGCCACCCTGAGGAATCCATTAAGGTAGAATTAATAAATAAATCATCAGAGGACAAGATTGGAATTAAGTACATTGTAACTTTAGAAGAAGATGGGTTGCAGTCAGAGTTTGAAGTCCAAAACTCAATGCATTTACCCCTTCAGATAACAGGGTCCATCCTGAGCCATCTGACAGTGAGTTCACCAGAAGCAACCTATGCAGTTGGATTAGAAAGATCAAATTACTGGAGGAGGCCCCTTTTGGAATCAGAATTTATTTTGAGTCCTCCTCCGGATTCTAATTACCAAGAAGGGTTTGGAAAAATATGGAACATACCAGCACTTCAGCAACTAATTCCTCATTGGGGTGCAACAAAAGATCAGAACAAAGAAGATATGAGTGGTGAAGAAGAGGATGGGTATAAGAATTTACGAGACAAGATTAGTCTCATTTACACAGATGCCCCTCGTAGTATTACAGTTATTGATAGGGGTAGAAGAAACTCATTGTCAATTGGAAGGATCGGATTGGACGAGATGTACCTCTTCAGTCCTGGCTCAAAAGTTGAAATTTACAGCAAGTATTCTTACATATTGGTTGGCCAAACTGCCATTCTCAAACCAATAGTAGTAAATCCTCAAGATGTTTGGAACGGAGGGCAATACATACACAATCCAAATCTATAA 1194 0.4255 MCNERQAKSIALITSLLLPTQFNSSSLAITCAINTPSHTYFKFPSGNHTFNSCKPLAAVASSVPYQPTNNLDYLEKEEFIGHDGVTFEAVGDGSVVAKMELKNGSVVSMLLPSGVITSYKAPMWHGGTVELLHTAVSEGDHGAALIQGGIFSNFTFTTDDCQVSFSPTHWVLSKIKSHPEESIKVELINKSSEDKIGIKYIVTLEEDGLQSEFEVQNSMHLPLQITGSILSHLTVSSPEATYAVGLERSNYWRRPLLESEFILSPPPDSNYQEGFGKIWNIPALQQLIPHWGATKDQNKEDMSGEEEDGYKNLRDKISLIYTDAPRSITVIDRGRRNSLSIGRIGLDEMYLFSPGSKVEIYSKYSYILVGQTAILKPIVVNPQDVWNGGQYIHNPNL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3048 397 Gene3D - 88 395 IPR014718 GO:0030246
Ahy20g3048 397 SUPERFAMILY Galactose mutarotase-like 114 391 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ahy20g3048 397 PANTHER PROTEIN NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 47 397 - -
Ahy20g3048 397 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 47 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3048 Ahy-Chr20 141176082 141178835 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3048 - - gmx:100775728 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3048 20 141176082 141178835 Ahy10g2485 10 114395081 114397769 hybridization
Ahy16g2263 16 125370904 125373267 Ahy20g3048 20 141176082 141178835 PCT
Ahy6g1934 6 94618377 94620997 Ahy20g3048 20 141176082 141178835 PCT
Ahy20g3048 20 141176082 141178835 Ahy16g2263 16 125370904 125373267 PCT
Ahy20g3048 20 141176082 141178835 Ahy6g1934 6 94618377 94620997 PCT