Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1045 ATGATCAAGCTCCTCTGCCGTCTCTGTTCGCACCTCCGGTGGCCAAAACGGCGCCGTTTCCGCAAATCGAACCGAAACAAAAGCACCCTAACCACCAGCACTTGTTCATCAGCATTGGTTCACCCAAACAAGAAACCGCAGAAACCAATCCGCGTAGCAACCTTCAACGCCGCACTCTTCTCCATGGCACCAGCGGTCCCCACCAACAACGACGAAGAACAAAACGCGCGCTGTGATCTCAAACCCAAAAGCATTCTCAAGCACTCTCCTCTTCACCCAATAACTTCGGTTGTTCCACCACCGGAACGTCAATCGAAGCTGAGAGTTTCCATCAACCTACCAGATAACGAGATTTCGCTTCTGAGAAGCAGACAATCGAGCTTCTCGGAGCACGAGAGAGAAGGAGGAGGGTCTTCTTGGCGATGGAGAAGCGTGGTGATGAGACAGTGCAACAGCTTCTCCGGCGTGGAAGGGAATGATGTGTACGGAATAAAGAGCCGGAAGACGGTGCTGGAGGTTCTGAGGGAGTTGGACGCTGACGTTTTGGCTTTGCAGGATGTGAAGGCGGACGAACAAAACGACATGAAGCCATTGTCGGATTTGGCCAAAGCTTTGGGCATGAACTACGTCTTTGCTGATAGCTGGGCTCCTGAATACGGCAACGCCGTTTTGTCCAGGTGGCCCATCAAACGATCCAACGTTCAGAAACTCTTCGACCACACCGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCTGAAGCTGGTGAAATGAACTTTTACTGCACCCATCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATTAATGCAATAATCCAGTCTAATAATGATGAGCCTCACATCTTAGCTGGAGGGCTTAACTCACTTGATGAATCAGATTACTCACAAGAAAGATGGACTGATATTGTTAAGTACTATGAAGAGATTGGAAAACCAACACCAAAGGTTGAAGTGATGAAATATCTAAAGAGTAAGCACTACACGGATGCTAAGGACTATTCAGGAGAATGTGTGCAAGGGACATGTAAGTATGGAACAAGGGTAGATTACATATTATCATCATCAGATTCAACATATAAGTTCGTAGCAGGGTCCTATCTTGTGCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTCAAAGTTGATGTGGTTAAAGAAAATAATAGCATTCTAAACAGTAGTCCTCTTCAAGAAGAAAACAATAATGTAACAAAGAAGCAGCAGAGAATGAAAACACAGCCAAGTCCATCAACTTGTATATGGAACAAAAACACATACGAGAGAGATATAGATTGA 1329 0.4552 MIKLLCRLCSHLRWPKRRRFRKSNRNKSTLTTSTCSSALVHPNKKPQKPIRVATFNAALFSMAPAVPTNNDEEQNARCDLKPKSILKHSPLHPITSVVPPPERQSKLRVSINLPDNEISLLRSRQSSFSEHEREGGGSSWRWRSVVMRQCNSFSGVEGNDVYGIKSRKTVLEVLRELDADVLALQDVKADEQNDMKPLSDLAKALGMNYVFADSWAPEYGNAVLSRWPIKRSNVQKLFDHTDFRNVLKATIDVPEAGEMNFYCTHLDHLDENWRMKQINAIIQSNNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEIGKPTPKVEVMKYLKSKHYTDAKDYSGECVQGTCKYGTRVDYILSSSDSTYKFVAGSYLVLSSKGTSDHHIVKVDVVKENNSILNSSPLQEENNNVTKKQQRMKTQPSPSTCIWNKNTYERDID* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1045 442 MobiDBLite consensus disorder prediction 20 46 - -
Ahy6g1045 442 MobiDBLite consensus disorder prediction 26 41 - -
Ahy6g1045 442 Gene3D Endonuclease/exonuclease/phosphatase 151 398 IPR036691 -
Ahy6g1045 442 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 18 435 - -
Ahy6g1045 442 Coils Coil 174 194 - -
Ahy6g1045 442 Pfam Endonuclease/Exonuclease/phosphatase family 166 387 IPR005135 GO:0003824
Ahy6g1045 442 SUPERFAMILY DNase I-like 166 394 IPR036691 -
Ahy6g1045 442 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 435 - -
Ahy6g1045 442 MobiDBLite consensus disorder prediction 404 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1045 Ahy-Chr6 13890709 13894530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1045 - - gmx:100820515 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0280 16 6162106 6166248 Ahy6g1045 6 13890709 13894530 hybridization
Ahy6g1045 6 13890709 13894530 Ahy12g2549 12 114627125 114631769 PCT
Ahy6g1045 6 13890709 13894530 Ahy2g2210 2 97975120 97979584 PCT
Ahy12g2549 12 114627125 114631769 Ahy6g1045 6 13890709 13894530 PCT
Ahy2g2210 2 97975120 97979584 Ahy6g1045 6 13890709 13894530 PCT