Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0280 ATGATGAAGCTCCTCTGCCGTCTCTGTTCGCACCTCCGGTGGTCAAAACGGCGCCGTTTCCGCAAATCGAACCGAAACAAAAGCACCCTAACCACCAGCACTTGTTCATCAGCATTGGTTCACCCAAACAAGAAACCGCAGAAACCAATCCGCGTAGCAACCTTCAACGCCGCACTCTTCTCCATGGCACCAGCAGTCCCCACCAACAACGACGAAGAACAAAACGCGCGCTGTGATCTCAAACCCAAAAGCATTCTCAAGCACTCTCCTCTTCACCCAATAACTTCGGTTGTTCCACCACCGGAACGTCAATCGAAGCTGAGAGTTTCCATCAACCTACCAGATAACGAGATTTCGCTTCTGAGAAGCAGACAATCGAGCTTCTCGGAGCACGAGAGAGAAGGAGGAGGATCTTCTTGGCGATGGAGAAGCGTGGTGATGAGACAGTGCAACAGCTTCTCCGGCGTGGAAGGGAATGATGTGTACGGAATAAAGAGCCGGAAGACGGTGCTGGAGGTTCTGAGGGAGTTGGACGCTGACGTTTTGGCTTTGCAGGATGTGAAGGCGGACGAACAAAACGACATGAAGCCATTGTCGGATTTGGCCAAAGCTTTGGGCATGAACTACGTCTTTGCTGATAGCTGGGCTCCTGAATACGGCAACGCCGTTTTGTCCAGGTGGCCCATCAAACGCTCCAACGTTCAGAAACTCTTCGACCACACCGATTTCAGGAATGTTCTGAAGGCCACCATCGATGTACCTGAAGCTGGTGAAATGAACTTTTACTGCACCCATCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATTAATGCAATAATCCAGTCTAATAATGATGAGCCTCACATCTTAGCTGGAGGGCTTAACTCACTTGATGAATCAGATTACTCACAAGAAAGATGGACTGATATTGTTAAGTACTATGAAGAGATTGGAAAACCAACACCAAAGGTTGAAGTGATGAAATATCTAAAGAGTAAGCACTACACGGATGCTAAGGACTATTCAGGGGAATGTGAATCTGTAGTGATGATTGCCAAAGGACAAAGTGTGCAAGGGACATGTAAGTATGGAACAAGGGTAGATTACATATTATCCTCATCAGATTCAACATATAAGTTCGTAGCAGGGTCCTATCTTGTGCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTCAAAGTTGATGTGGTTAAAGAAAATAATAGCATTCTAAACAGTAGTCCTCTTCAAGAAGAAAACAATAATGTAACAAAGAAGCAGCAGAGAATGAAAACACAGCCAAGTCCATCAACTTGTATATGGAACAAAAACACATACGGGAGAGATATTGATTGA 1362 0.4552 MMKLLCRLCSHLRWSKRRRFRKSNRNKSTLTTSTCSSALVHPNKKPQKPIRVATFNAALFSMAPAVPTNNDEEQNARCDLKPKSILKHSPLHPITSVVPPPERQSKLRVSINLPDNEISLLRSRQSSFSEHEREGGGSSWRWRSVVMRQCNSFSGVEGNDVYGIKSRKTVLEVLRELDADVLALQDVKADEQNDMKPLSDLAKALGMNYVFADSWAPEYGNAVLSRWPIKRSNVQKLFDHTDFRNVLKATIDVPEAGEMNFYCTHLDHLDENWRMKQINAIIQSNNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEIGKPTPKVEVMKYLKSKHYTDAKDYSGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDSTYKFVAGSYLVLSSKGTSDHHIVKVDVVKENNSILNSSPLQEENNNVTKKQQRMKTQPSPSTCIWNKNTYGRDID* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0280 453 Pfam Endonuclease/Exonuclease/phosphatase family 166 398 IPR005135 GO:0003824
Ahy16g0280 453 MobiDBLite consensus disorder prediction 415 440 - -
Ahy16g0280 453 Coils Coil 174 194 - -
Ahy16g0280 453 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 18 446 - -
Ahy16g0280 453 SUPERFAMILY DNase I-like 166 405 IPR036691 -
Ahy16g0280 453 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 446 - -
Ahy16g0280 453 Gene3D Endonuclease/exonuclease/phosphatase 151 409 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0280 Ahy-Chr16 6162106 6166248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0280 - - vra:106757483 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0280 16 6162106 6166248 Ahy16g0280 16 6162106 6166248 ECH
Ahy16g0280 16 6162106 6166248 Ahy6g1045 6 13890709 13894530 hybridization
Ahy16g0280 16 6162106 6166248 Ahy12g2549 12 114627125 114631769 PCT
Ahy16g0280 16 6162106 6166248 Ahy2g2210 2 97975120 97979584 PCT
Ahy12g2549 12 114627125 114631769 Ahy16g0280 16 6162106 6166248 PCT
Ahy2g2210 2 97975120 97979584 Ahy16g0280 16 6162106 6166248 PCT