LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy2g2210	ATGCTCAAGCTCCTCAACACCAAGCTCCGCCGCTTCTTCCTCCTCCGGTGGTGGCCACTACGCCGCCGTAGTTCAAGGTGCAAAGTAGTCATCACAAAGAAGCCCAAAAACGACAACCCAAAACCCCAAAACGACCCAAGCTCGAATCTTTCCACCATTTCCGATCAAAACGCCCAAATGGGTACTCAAAAACACGAAAAACCAATTCGCATCGCAACCTTCAACGCCGCACTGTTTTCCATGGCGCCAGCGGTTCCATCTCAGAGAACAGAGAAAGCTCAGAACTTTGACGACCAAAACGGCGTCGCTTCGAGACAACGAAGACCCTTTGACCAAAATTCGAGGCTAAAGTCAACGAACGAGAAACCGAGGAGCATTCTGAAGCGTTCTCATTCTCACTCTCCCCTTCATCATCACATACCCTGTTCTGAAAACAGAGCACTCTGCATCAGCAACAAGCATCAACAACAGCAACAACACCACTTTTCGAAATCGAAGCTAAGAGTTTCGATTAATTTACCGGATAACGAGATCTCCATGCTGAGAAATCGCCAACCGAGCTTCTCGGAGCACGAGAAGGTGGTGATTGCGGCGCGAAACGGGTGGCAGAGGAAGACGGTGGTGGAGGTGCTGAAAGAGGTAGGTGCTGATATATTGGGTTTGCAAGAAGTGAAGGCAGAAGAAGAGAATGGGATGAAGCCACTTTCAGATTTGGCCAAAGCATTGGGAATGGATCACTTTGTGTTTGCAGAGAGTTGGGCACCTCAGTTTGGAAATGCTATCTTATCCAAATGGCCCATTAAACGTTGGACTTCCATCAACCTCTTTGATCACTCTGATTTTAGGAATGTTTTGAAGGCTACTATTGATGTACCTCAAGTAGGTGAACTCAATTTTTATTGTACTCACCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCTCACATCTTAGCAGGAGGCCTTAATTCATTGGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTTAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAAAGTAAACAATACACAGATGCTAAGGACTTCGCCGGAGAATGCGAATCGGTCGTTGTGATTGCCAAAGGCCAAAGTGTTCAAGGGACATGCAAGTATGGAACTCGAGTCGATTACATATTATCGTCGTCGAATTGTTCGTACAAGTTCGTCCCCGGGTCCTATTTAGTCCTCTCCTCAAAAGGGACTTCAGATCATCACATAGTGAGAGCTGATGTGATGAAGGTAAATAGCAATAATGAAGGAAATAATGTGACAAGAAAAACTAAACAAGAAAGAAAACAGAAAGTTATAAGAATAACACATGAAACTCCCTCTAAAGGTATATGGAAAACACACCATGGAGAGATATATTAA	1464	0.4392	MLKLLNTKLRRFFLLRWWPLRRRSSRCKVVITKKPKNDNPKPQNDPSSNLSTISDQNAQMGTQKHEKPIRIATFNAALFSMAPAVPSQRTEKAQNFDDQNGVASRQRRPFDQNSRLKSTNEKPRSILKRSHSHSPLHHHIPCSENRALCISNKHQQQQQHHFSKSKLRVSINLPDNEISMLRNRQPSFSEHEKVVIAARNGWQRKTVVEVLKEVGADILGLQEVKAEEENGMKPLSDLAKALGMDHFVFAESWAPQFGNAILSKWPIKRWTSINLFDHSDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKQYTDAKDFAGECESVVVIAKGQSVQGTCKYGTRVDYILSSSNCSYKFVPGSYLVLSSKGTSDHHIVRADVMKVNSNNEGNNVTRKTKQERKQKVIRITHETPSKGIWKTHHGEIY*	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy2g2210	487	Gene3D	Endonuclease/exonuclease/phosphatase	181	444	IPR036691	-
	Ahy2g2210	487	PANTHER	CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR	204	481	-	-
	Ahy2g2210	487	PANTHER	CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR	1	194	-	-
	Ahy2g2210	487	SUPERFAMILY	DNase I-like	200	442	IPR036691	-
	Ahy2g2210	487	MobiDBLite	consensus disorder prediction	85	138	-	-
	Ahy2g2210	487	MobiDBLite	consensus disorder prediction	41	63	-	-
	Ahy2g2210	487	PANTHER	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN	204	481	-	-
	Ahy2g2210	487	MobiDBLite	consensus disorder prediction	30	65	-	-
	Ahy2g2210	487	MobiDBLite	consensus disorder prediction	110	128	-	-
	Ahy2g2210	487	ProSitePatterns	AP endonucleases family 1 signature 1.	216	225	IPR020847	GO:0003677\|GO:0004519\|GO:0006281
	Ahy2g2210	487	MobiDBLite	consensus disorder prediction	87	109	-	-
	Ahy2g2210	487	Pfam	Endonuclease/Exonuclease/phosphatase family	204	435	IPR005135	GO:0003824
	Ahy2g2210	487	PANTHER	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN	1	194	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy2g2210	Ahy-Chr2	97975120	97979584	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy2g2210	-		-	gsj:114390420	616.305

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy12g2549	12	114627125	114631769	Ahy2g2210	2	97975120	97979584	hybridization
	Ahy16g0280	16	6162106	6166248	Ahy2g2210	2	97975120	97979584	PCT
	Ahy6g1045	6	13890709	13894530	Ahy2g2210	2	97975120	97979584	PCT
	Ahy2g2210	2	97975120	97979584	Ahy16g0280	16	6162106	6166248	PCT
	Ahy2g2210	2	97975120	97979584	Ahy6g1045	6	13890709	13894530	PCT