Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2549 ATGCTCAAGCTCCTCAACACCAAGCTCCGCCGCTTCTTCCTCCTCCGGTGGTGGCCACTACGCCGCCGTAGTTCAAGGTGCAAAGTAGTTATCACAAAGAAGCCCAAAAACGACAACCCAAAACCCCAAACCGACCCAAGCTCGAATCTTTCCACCATTTCCGATCAAAACGCCCAAATGGGTACTCAAAAACACGAAAAACCAATTCGCATCGCAACCTTCAACGCCGCACTGTTTTCCATGGCGCCAGCGGTTCCACCTCAGAGAACAGAGAAAGCTCAGAACTTTGACGACCAAAACGGCGTCGCTTCGAAACAACGAAGACCCTTTGACCAAAATTCGAGGCCAAAGTCAACGAACGAGAAACCGAGGAGCATTCTGAAGCGTTCTCATTCTCACTCTCCCCTTCATCATCACATACCCTGTTCTGAAAACAGAGCACTCTGCATCAGCAACAAGCATCAACAACAACCACAACACCACTTTTCGAAATCGAAGCTAAGAGTTTCCATTAATTTACCGGATAACGAGATCTCCATGCTGAGAAATCGCCAACCGAGCTTCTCGGAGCACGAGAAGGTGGTGATTGCGGCGCGAAACGGGTGGCAGAGGAAGACGGTGGTGGAGGTGCTGAAAGAGGTAGGTGCAGATATATTGGGTTTGCAAGAAGTGAAGGCAGAAGAAGAGAATGGGATGAAGCCACTTTCAGATTTGGCGAAGGCATTGGGAATGGATCACTTTGTGTTTGCAGAGAGTTGGGCACCTCAGTTTGGAAATGCTGTCTTATCCAAATGGCCCATTAAACGTTGGACTTCCATCAACCTCTTTGATCACTCTGATTTTAGGAATGTTTTGAAGGCTACTATTGATGTACCTCAAGTAGGTGAACTCAATTTTTATTGTACTCACCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCTCACATCTTAGCAGGAGGCCTTAATTCATTGGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTTAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAAGTTGAAGTGATGAAATATCTCAAAAGTAAACAATACACAGATGCTAAGGACTTCGCCGGAGAATGCGAATCTGTCGTCGTGATTGCCAAAGGCCAAAGTGTTCAAGGGACATGCAAGTATGGAACTCGAGTCGATTACATATTATCGTCGTCGAATTGTTCGTATAAGTTCGTCCCCGGGTCCTATTTAGTCCTCTCCTCAAAAGGGACTTCAGATCATCACATAGTGAGAGCTGATGTGATGAAGGTAAATAGCAATAATGAAGGAAATAATGTGACAAGAAAAACTAAACAAGAAAGAAAACAGAAAGTTATAAGAATAACACATGAGACTCCCTCTAAAGGTATATGGAAAACACACCATGGAGAGATATATTAA 1464 0.4406 MLKLLNTKLRRFFLLRWWPLRRRSSRCKVVITKKPKNDNPKPQTDPSSNLSTISDQNAQMGTQKHEKPIRIATFNAALFSMAPAVPPQRTEKAQNFDDQNGVASKQRRPFDQNSRPKSTNEKPRSILKRSHSHSPLHHHIPCSENRALCISNKHQQQPQHHFSKSKLRVSINLPDNEISMLRNRQPSFSEHEKVVIAARNGWQRKTVVEVLKEVGADILGLQEVKAEEENGMKPLSDLAKALGMDHFVFAESWAPQFGNAVLSKWPIKRWTSINLFDHSDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKQYTDAKDFAGECESVVVIAKGQSVQGTCKYGTRVDYILSSSNCSYKFVPGSYLVLSSKGTSDHHIVRADVMKVNSNNEGNNVTRKTKQERKQKVIRITHETPSKGIWKTHHGEIY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2549 487 Gene3D Endonuclease/exonuclease/phosphatase 181 444 IPR036691 -
Ahy12g2549 487 MobiDBLite consensus disorder prediction 86 139 - -
Ahy12g2549 487 MobiDBLite consensus disorder prediction 92 109 - -
Ahy12g2549 487 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 204 481 - -
Ahy12g2549 487 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 1 194 - -
Ahy12g2549 487 MobiDBLite consensus disorder prediction 41 63 - -
Ahy12g2549 487 MobiDBLite consensus disorder prediction 110 128 - -
Ahy12g2549 487 ProSitePatterns AP endonucleases family 1 signature 1. 216 225 IPR020847 GO:0003677|GO:0004519|GO:0006281
Ahy12g2549 487 SUPERFAMILY DNase I-like 200 442 IPR036691 -
Ahy12g2549 487 MobiDBLite consensus disorder prediction 30 66 - -
Ahy12g2549 487 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 204 481 - -
Ahy12g2549 487 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 194 - -
Ahy12g2549 487 Pfam Endonuclease/Exonuclease/phosphatase family 204 435 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2549 Ahy-Chr12 114627125 114631769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2549 - - gsj:114390420 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2549 12 114627125 114631769 Ahy12g2549 12 114627125 114631769 ECH
Ahy12g2549 12 114627125 114631769 Ahy2g2210 2 97975120 97979584 hybridization
Ahy16g0280 16 6162106 6166248 Ahy12g2549 12 114627125 114631769 PCT
Ahy6g1045 6 13890709 13894530 Ahy12g2549 12 114627125 114631769 PCT
Ahy12g2549 12 114627125 114631769 Ahy16g0280 16 6162106 6166248 PCT
Ahy12g2549 12 114627125 114631769 Ahy6g1045 6 13890709 13894530 PCT