Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1035 ATGGCATCGCCCTTCATCTTCCTAATTTTCTTCTTCATATTCAGAGTGCATCATGCTATATTGGATCCCAATGATTTCTTGGCTCTTCAATCTATTCGTAAATCGCTTCACGATGTTCCCGGCTCTAACTTCTTTTCTTCTTGGGACTTCACCTCTGATCCATGCACATTCTCCGGCGTCTTCTGCCATGCCGATAGAGTTGTTGCTCTAAACCTTGGCGATCCCCGCGCCGGCTCCCCCGGCCTCACCGGAAAACTTGACCCCGCACTCTCAAAGCTCTCCGCTCTCGCCGAATTAACAGTCGTCCCCGGCCGAATCTACGGCCATCTCCCGCCCTCTCTCTCTGCACTTACCAATCTCCGATTCCTTGGCATTAGTCGTAATTTCGTCTCCGGCGACATTCCGGCAGGTTTAGGCAACCTTCGCAACCTCAGAACTCTCGATCTCAGCTACAACCAGCTCTCCGGAACAATCCCCCCGGTGATTGGAAACCTCCCGGAGCTCGTCAACGTCGTCCTCTGCCATAACCGTCTCACCGGTTCGGTTCCCAAATTCTCATCTCAAACGCTAACCCGGCTCGATCTGAAACATAACACTCTCTCCGGTTCGATCGAACCGGATTCCCTCCCTCCCTCACTCCACTACCTCTCCCTCTCATGGAATTGGTTCACTGGACCGGTAGACCGGTTACTAAGCAGGCTCAACCAGCTAAACTACCTCGACCTAAGCCTGAACCGGTTCACCGGTTCAATTCCAGCTCAACTCTTTACGTACCCCCTCACAAACCTCCAGCTCGAGAGGAACCAGTTCTCGGGTCCGGTCCAACCGGTCAACGACGTTTCGATCCAGACCGTTGATCTTAGCTATAACAGATTCTCCGGTGAGATATCGCCCATGCTGGCGAACGTGCAGTATCTTTACCTGAACAACAACGGGTTTTCCGGGCAGGTCCCTGCCAGCTTCGTTGACCGGTTGCTGGCGGCGAGTATAGAGATTCTTTATCTGCAGCATAATTACCTGACCGGAATAGCGATAAGTCCCACGGCGGAGATCCCGGTGAGCAGCTCGCTTTGCGTTCAGTATAACTGTATGGTGCCGCCGGTGCAGACGGGGTGTCCGGTGAGGTCCGGGACGCAGAAGATTCGGCCTGCTGAGGAGTGCAATCAATGGAGGGGATGA 1179 0.5369 MASPFIFLIFFFIFRVHHAILDPNDFLALQSIRKSLHDVPGSNFFSSWDFTSDPCTFSGVFCHADRVVALNLGDPRAGSPGLTGKLDPALSKLSALAELTVVPGRIYGHLPPSLSALTNLRFLGISRNFVSGDIPAGLGNLRNLRTLDLSYNQLSGTIPPVIGNLPELVNVVLCHNRLTGSVPKFSSQTLTRLDLKHNTLSGSIEPDSLPPSLHYLSLSWNWFTGPVDRLLSRLNQLNYLDLSLNRFTGSIPAQLFTYPLTNLQLERNQFSGPVQPVNDVSIQTVDLSYNRFSGEISPMLANVQYLYLNNNGFSGQVPASFVDRLLAASIEILYLQHNYLTGIAISPTAEIPVSSSLCVQYNCMVPPVQTGCPVRSGTQKIRPAEECNQWRG* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1035 392 ProSiteProfiles Leucine-rich repeat profile. 143 165 IPR001611 GO:0005515
Ahy6g1035 392 Gene3D Ribonuclease Inhibitor 188 259 IPR032675 -
Ahy6g1035 392 PRINTS Leucine-rich repeat signature 144 157 - -
Ahy6g1035 392 PRINTS Leucine-rich repeat signature 234 247 - -
Ahy6g1035 392 SMART LRR_typ_2 141 165 IPR003591 -
Ahy6g1035 392 SMART LRR_typ_2 300 323 IPR003591 -
Ahy6g1035 392 SMART LRR_typ_2 234 258 IPR003591 -
Ahy6g1035 392 SUPERFAMILY L domain-like 45 363 - -
Ahy6g1035 392 Gene3D Ribonuclease Inhibitor 260 365 IPR032675 -
Ahy6g1035 392 PANTHER LRR RECEPTOR-LIKE KINASE 5 389 - -
Ahy6g1035 392 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Ahy6g1035 392 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Ahy6g1035 392 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Ahy6g1035 392 Pfam Leucine Rich repeat 187 202 IPR001611 GO:0005515
Ahy6g1035 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1035 Ahy-Chr6 13757136 13758893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1035 8 342 Receptor kinase-like Gene Family AT5G62230 29.683 2.05e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1035 - - gmx:100817314 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0289 16 6283638 6285393 Ahy6g1035 6 13757136 13758893 hybridization
Ahy6g1035 6 13757136 13758893 Ahy12g2556 12 114799061 114801527 PCT
Ahy6g1035 6 13757136 13758893 Ahy2g2218 2 98080252 98082599 PCT
Ahy12g2556 12 114799061 114801527 Ahy6g1035 6 13757136 13758893 PCT
Ahy2g2218 2 98080252 98082599 Ahy6g1035 6 13757136 13758893 PCT