Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2218 ATGGCGAGGCGAAAGACCGCTGTTCCTCTCTTTCTGCTTTGTTTTCTTCACATTCACTTTATTCTGATTCTGAACGTGCATGCCATTTTGGACCCAATTGATTTCTTAGCTCTTCAATCCATTCGGAAGAGTCTCCAAGACATGCCAGGTTCAACCTTTTTCTCCGATTGGGACTTCACTTCCGATCCCTGCAACTTCTCCGGCGTGTTCTGTGATTCGGACAGGGTTGTTTCTCTTAACCTTGGCGACCCGAGAGCCGGCTCGCCCGGTCTTACCGGTCGGATAGACCGGGCGATTGGGAAACTCTCTTCGCTTGCCGAGTTTACTGTCGTTCCGGGGAGAATCTACGGTAGATTGCCGGAGTCAATTTCCGATTTGAAGAACTTGAGGTTCCTTGGAATCAGCCGGAATTTCATCTCCGGCGAGATTCCGTCAGGGTTGGGTGGTCTCCGGCTGTTAAGGACCGTTGATCTCAGCTTTAACCAGCTCGCCGGAGTAATTCCTCCGGCGATCGGATCTTTGCCGGAGCTTACTAACCTCATGCTCTGCCACAACAAGCTAACCGGTTCAACTCCGCGGTTCGAGTCGAAAACCCTATCCCGGGTTGATTTGAAGCACAATGCTCTATCCGGTTCGCTTGGACCAAACCACTTTCCACCTTCTATGCTGTATTTGTCACTGGCGCGGAACCAGTTGACCGGTCCGGTGGACCAGCTTCTGAACCGGTTGGATCAGCTTAATTACCTTGACCTGAGCCTGAACCGGTTCACGGGGCCAATCCCCGGAAGGATCTTCTCGTTCCCTTTAACGAACCTACAATTGGAGAGGAACCAGTTCTCTGGTCCGGTTAGGCCATTGGATCAGGTCTCAATTGCAACGGTTGATCTAAGCTACAACCGATTTTATGGTCAAATATCGCCGATGCTCGCATCGGTTCAGAACCTATACTTGAACAATAACCGGTTCACGGGGCGAGTTCCTGCTAGCTTCGTGAACCGGTTGTTGGACTCAAGCATTCAGATACTGTATTTGCAGCATAACTACCTGACTGGAATTGAGATTAGTCCAACGGCCGTGATTCCTCTAAGGAGTTCACTGTGTCTTCAGTATAATTGCATGGTCCCTCCCGTAGAGACTCCATGCCCCTTGAGGGCTGGGAAAGAGAAGACAAGGCCTATTGCTCAGTGTAACCAATTGAAAGGATGA 1206 0.5041 MARRKTAVPLFLLCFLHIHFILILNVHAILDPIDFLALQSIRKSLQDMPGSTFFSDWDFTSDPCNFSGVFCDSDRVVSLNLGDPRAGSPGLTGRIDRAIGKLSSLAEFTVVPGRIYGRLPESISDLKNLRFLGISRNFISGEIPSGLGGLRLLRTVDLSFNQLAGVIPPAIGSLPELTNLMLCHNKLTGSTPRFESKTLSRVDLKHNALSGSLGPNHFPPSMLYLSLARNQLTGPVDQLLNRLDQLNYLDLSLNRFTGPIPGRIFSFPLTNLQLERNQFSGPVRPLDQVSIATVDLSYNRFYGQISPMLASVQNLYLNNNRFTGRVPASFVNRLLDSSIQILYLQHNYLTGIEISPTAVIPLRSSLCLQYNCMVPPVETPCPLRAGKEKTRPIAQCNQLKG* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2218 401 Gene3D Ribonuclease Inhibitor 197 373 IPR032675 -
Ahy2g2218 401 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 398 - -
Ahy2g2218 401 PANTHER LRR RECEPTOR-LIKE KINASE 10 398 - -
Ahy2g2218 401 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Ahy2g2218 401 SUPERFAMILY L domain-like 44 373 - -
Ahy2g2218 401 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2218 Ahy-Chr2 98080252 98082599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2218 37 351 Receptor kinase-like Gene Family AT5G62230 32.416 1.03e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2218 - - gmx:100800224 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2556 12 114799061 114801527 Ahy2g2218 2 98080252 98082599 hybridization
Ahy16g0289 16 6283638 6285393 Ahy2g2218 2 98080252 98082599 PCT
Ahy6g1035 6 13757136 13758893 Ahy2g2218 2 98080252 98082599 PCT
Ahy2g2218 2 98080252 98082599 Ahy16g0289 16 6283638 6285393 PCT
Ahy2g2218 2 98080252 98082599 Ahy6g1035 6 13757136 13758893 PCT