Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0289 ATGGCGTCGCCCTTCATCTTCCTAATTTTCTTCTTCATATTCAGAGTGCATCATGCTATATTGGATCCCAATGATTTCTTGGCTCTTCAATCTATTCGTAAATCGCTTCACGATGTTCCTGGCTCTAACTTCTTTTCTTCTTGGGACTTCACCTCTGATCCATGCACATTCTCCGGCGTCTTCTGCCATGCCGACAGAGTCGTCGCTCTAAACCTTGGCGATCCCCGCGCCGGCTCCCCCGGCCTCACCGGAAAACTTGACCCCGCACTCTCCAAGCTCTCCGCTCTCGCCGAATTAACCGTCGTCCCCGGCCGAATCTACGGCCATCTCCCGCCCTCTCTCTCTGCACTTACCAATCTCCGATTCCTTGGCATTAGTCGTAATTTCATCTCCGGCGACATTCCGGCAGGTTTAGGCAACCTTCGCAGCCTGAGAACTCTCGATCTCAGCTACAACCAGCTCTCCGGAACAATCCCTCCGGCGATTGGAAACCTCCCGGAGCTCGTCAACGTCGTCCTCTGCCATAACCGTCTAACCGGTTCGGTTCCCAGATTCTCATCTCAAACGCTAACCCGGCTCGATCTGAAACATAACACTCTCTCCGGTTCGATCGAACCGGATTCCCTCCCTCCCTCACTCCACTACCTCTCCCTCTCATGGAACTGGTTCACTGGACCGGTAGACCGGTTACTAAGCAGGCTCAACCAGCTAAACTACCTCGACCTAAGCCTGAACCGGTTCACCGGTTCAATTCCAGCTCAACTCTTTACGTACCCCCTAACAAACCTCCAGCTCGAGAGGAACCAGTTCTCGGGTCCGGTCCAACCGGTCAACGACGTTTCGATCCAGACCGTTGATCTTAGCTATAACAGATTCTCCGGTGAGATATCGCCCATGCTGGCGAACGTGCAGTATCTTTACCTGAACAACAACGGGTTTTCCGGGCAGGTCCCTGCCAGCTTCGTTGATCGGTTGCTGGCGGCGAGTATAGAGATTCTTTATCTGCAGCATAATTACCTGACCGGAATAGCGATAAGTCCCACGGCGGAGATTCCGGTGAGCAGCTCGCTTTGCGTTCAGTATAACTGTATGGTGCCGCCGGTGCAGACGGGGTGTCCGGTGAGGTCCGGGACGCAGAAGATTCGGCCTGCTGAGGAGTGCAATCAATGGAGGGGATGA 1179 0.5394 MASPFIFLIFFFIFRVHHAILDPNDFLALQSIRKSLHDVPGSNFFSSWDFTSDPCTFSGVFCHADRVVALNLGDPRAGSPGLTGKLDPALSKLSALAELTVVPGRIYGHLPPSLSALTNLRFLGISRNFISGDIPAGLGNLRSLRTLDLSYNQLSGTIPPAIGNLPELVNVVLCHNRLTGSVPRFSSQTLTRLDLKHNTLSGSIEPDSLPPSLHYLSLSWNWFTGPVDRLLSRLNQLNYLDLSLNRFTGSIPAQLFTYPLTNLQLERNQFSGPVQPVNDVSIQTVDLSYNRFSGEISPMLANVQYLYLNNNGFSGQVPASFVDRLLAASIEILYLQHNYLTGIAISPTAEIPVSSSLCVQYNCMVPPVQTGCPVRSGTQKIRPAEECNQWRG* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0289 392 PRINTS Leucine-rich repeat signature 144 157 - -
Ahy16g0289 392 PRINTS Leucine-rich repeat signature 234 247 - -
Ahy16g0289 392 Gene3D Ribonuclease Inhibitor 188 278 IPR032675 -
Ahy16g0289 392 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Ahy16g0289 392 Gene3D Ribonuclease Inhibitor 279 365 IPR032675 -
Ahy16g0289 392 SMART LRR_typ_2 141 165 IPR003591 -
Ahy16g0289 392 SMART LRR_typ_2 300 323 IPR003591 -
Ahy16g0289 392 SMART LRR_typ_2 234 258 IPR003591 -
Ahy16g0289 392 SUPERFAMILY L domain-like 45 363 - -
Ahy16g0289 392 Pfam Leucine Rich repeat 187 202 IPR001611 GO:0005515
Ahy16g0289 392 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Ahy16g0289 392 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Ahy16g0289 392 PANTHER LRR RECEPTOR-LIKE KINASE 5 389 - -
Ahy16g0289 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0289 Ahy-Chr16 6283638 6285393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0289 8 342 Receptor kinase-like Gene Family AT5G62230 29.971 4.98e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0289 - - gmx:100817314 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0289 16 6283638 6285393 Ahy16g0289 16 6283638 6285393 ECH
Ahy16g0289 16 6283638 6285393 Ahy6g1035 6 13757136 13758893 hybridization
Ahy16g0289 16 6283638 6285393 Ahy12g2556 12 114799061 114801527 PCT
Ahy16g0289 16 6283638 6285393 Ahy2g2218 2 98080252 98082599 PCT
Ahy12g2556 12 114799061 114801527 Ahy16g0289 16 6283638 6285393 PCT
Ahy2g2218 2 98080252 98082599 Ahy16g0289 16 6283638 6285393 PCT