Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2556 ATGGCGAGGCGAAAGACCGCTATTCCTCTCTTTCTGCTTTGTTCTCTTCACATTCACTTTATTCTGATTCTCAACGTGCATGCCATTTTGGACCCAATTGATTTCTTAGCTCTTCAATCCATTCGGAAGAGTCTCCAAGACATGCCAGGTTCAACCTTTTTCTCCGATTGGGACTTCACTTCCGATCCCTGCAACTTCTCCGGCGTCTTCTGTGATTCGGACAGGGTTGTTTCTCTTAACCTTGGCGACCCCAGAGCCGGCTCGCCCGGTCTTACCGGTCGGATAGACCGGGCGATTGGGAAACTCTCTTCGCTCGCCGAGTTTACTGTCGTTCCCGGGAGAATCTACGGTAGATTGCCGGAGTCAATTTCCGACTTGAAGAACTTGAGGTTTCTTGGAATCAGCCGGAATTTCATCTCCGGCGAGATTCCGTCAGGGTTGGGTGGTCTCCGGCTGTTAAGGACCGTTGATCTCAGCTTTAACCAGCTCGCCGGAGTAATTCCTCCGGCGATCGGATCTTTGCCGGAGCTTACTAATCTCATGCTATGCCACAACAAGCTAACCGGTTCGATTCCCCGGTTCGAGTCAAAAACCCTATCCCGGGTTGATTTGAAGCACAATGCTCTATCAGGTTCGCTTGGACCAAACCATTTTCCTCCTTCTATGCTGTATTTGTCACTGGCGTGGAACCAGTTGACCGGTCCGGTGGACCAGCTTCTGAACCGGTTGGAACAGCTCAATTACCTTGACCTGAGCCTGAACCGGTTCACGGGGCCAATTCCCGGAAGTATCTTCTCATTCCCTTTAACGAACCTACAATTGGAGAGGAACCAGTTCTCTGGTCCGGTTAGGCCATTGGATCAGGTATCAATTGCAACGGTTGATCTAAGCTACAACCGATTTTATGGTCAAATATCGCCGATGCTCGCATCGGTTCAGAACCTATACTTGAACAATAACCGGTTCACAGGGCGAGTTCCTGCTAGCTTCGTGAACCGGTTATTGGACTCGAGCATTCAGATACTGTATTTGCAGCATAACTACCTGACTGGAATTGAGATTAGTCCAACGGCGGTGATTCCTCTAAGGAGTTCACTGTGTCTTCAGTATAACTGCATGGTCCCTCCCGTAGAGACTCCATGTCCCTTGAGGGCTGGGAAAGAGAAGACAAGGCCTATTGCTCAGTGTAACCAACTGAAAGGATGA 1206 0.4975 MARRKTAIPLFLLCSLHIHFILILNVHAILDPIDFLALQSIRKSLQDMPGSTFFSDWDFTSDPCNFSGVFCDSDRVVSLNLGDPRAGSPGLTGRIDRAIGKLSSLAEFTVVPGRIYGRLPESISDLKNLRFLGISRNFISGEIPSGLGGLRLLRTVDLSFNQLAGVIPPAIGSLPELTNLMLCHNKLTGSIPRFESKTLSRVDLKHNALSGSLGPNHFPPSMLYLSLAWNQLTGPVDQLLNRLEQLNYLDLSLNRFTGPIPGSIFSFPLTNLQLERNQFSGPVRPLDQVSIATVDLSYNRFYGQISPMLASVQNLYLNNNRFTGRVPASFVNRLLDSSIQILYLQHNYLTGIEISPTAVIPLRSSLCLQYNCMVPPVETPCPLRAGKEKTRPIAQCNQLKG* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2556 401 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Ahy12g2556 401 Gene3D Ribonuclease Inhibitor 197 374 IPR032675 -
Ahy12g2556 401 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Ahy12g2556 401 SUPERFAMILY L domain-like 54 380 - -
Ahy12g2556 401 PANTHER LRR RECEPTOR-LIKE KINASE 19 398 - -
Ahy12g2556 401 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 19 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2556 Ahy-Chr12 114799061 114801527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2556 37 351 Receptor kinase-like Gene Family AT5G62230 32.722 3.01e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2556 - - gmx:100800224 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2556 12 114799061 114801527 Ahy12g2556 12 114799061 114801527 ECH
Ahy12g2556 12 114799061 114801527 Ahy2g2218 2 98080252 98082599 hybridization
Ahy16g0289 16 6283638 6285393 Ahy12g2556 12 114799061 114801527 PCT
Ahy6g1035 6 13757136 13758893 Ahy12g2556 12 114799061 114801527 PCT
Ahy12g2556 12 114799061 114801527 Ahy16g0289 16 6283638 6285393 PCT
Ahy12g2556 12 114799061 114801527 Ahy6g1035 6 13757136 13758893 PCT