Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0039 ATGGCAACGATGTGGAATTCTTTATGCGTGGCCAATGGCACTCTCTTCAACTCTTCTTCTCCACTTCTTCCTCTTCGTTTCAATTCTAACTCCAACCTTCGATTTCGCCGCGCCACAATCACAAGCATGTGCGTTCCTGAAAACGACGTCGTTGTGATCGGTTACGGAATGACTACAGTTGACTTCTTGGCCACCGTTGACTCTTTTCCGAAGCCCGACGACAAGGTCCGCACCACCTCCTTCAAGGTTCAAGGAGGTGGCAATGCCGGCAACGCCTTAACCTGCGCCGCAAGACTCGGCTTGAAGCCTAAGCTCATCTCCAAGGTCGGCGACGATTCCCAAGGCCACGCTATTCTCAACGAGCTTCAGCGCGACGCCGTCGACACCTCCTTTGTCCTGGTATCAAAGGGTGGAAGTTCCGCGTTTTCGTATGTTCTAATCGACAACCAGACAAAAACTCGGACTAGTATTTACACCCCTGCACATCCTCCCATGATGCCAGATGATCAATCCCAATCAACCTTATTATCTGCATTTAATGAAGCAAGATTAGTGTATTTTGATGGACTGACTACCGATACCGCTCTATTCATTGCACAAGAGGCCGCCCGAAATAAGATACCGATTTTAGTTGAGGCCGAATCACCTAAGGAAGGGTTGGATGAGCTTCTGAAACTTGCTGACTTTGCTGTATGCTCTGCAAGGTTTCCTAAGGGGGTGAAAAAATTTAGAGCAAACGGAAGAGGGACAGTTTGTGGAAGATTCTTTCTTGGAACAGCAGAGAGGATACCGGATGGTGAGCTGATCGATACAACTGGTGCTGGAGATGCATTTATTGGTGCTATTCTTTATGCAATCTGCACAAACATGGAACCAGAGAAAATGTTACCATTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGGGCTTTGGGAGCTAGAACTGGTCTTCCATATCTGACAGATCCACGCCTAGCAGCCTATTTATGCTAG 990 0.4808 MATMWNSLCVANGTLFNSSSPLLPLRFNSNSNLRFRRATITSMCVPENDVVVIGYGMTTVDFLATVDSFPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPKLISKVGDDSQGHAILNELQRDAVDTSFVLVSKGGSSAFSYVLIDNQTKTRTSIYTPAHPPMMPDDQSQSTLLSAFNEARLVYFDGLTTDTALFIAQEAARNKIPILVEAESPKEGLDELLKLADFAVCSARFPKGVKKFRANGRGTVCGRFFLGTAERIPDGELIDTTGAGDAFIGAILYAICTNMEPEKMLPFAAQVAAAKCRALGARTGLPYLTDPRLAAYLC* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0039 329 SUPERFAMILY Ribokinase-like 52 319 IPR029056 -
Ahy6g0039 329 Gene3D - 47 238 IPR029056 -
Ahy6g0039 329 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 239 328 - -
Ahy6g0039 329 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 33 238 - -
Ahy6g0039 329 CDD ribokinase_group_B 51 318 - -
Ahy6g0039 329 Gene3D - 248 325 IPR029056 -
Ahy6g0039 329 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 33 238 - -
Ahy6g0039 329 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 239 328 - -
Ahy6g0039 329 Pfam pfkB family carbohydrate kinase 261 317 IPR011611 -
Ahy6g0039 329 Pfam pfkB family carbohydrate kinase 49 234 IPR011611 -
Ahy6g0039 329 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 270 283 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0039 Ahy-Chr6 628930 632416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0039 - - mtr:MTR_7g099280 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1442 16 29478398 29481855 Ahy6g0039 6 628930 632416 hybridization
Ahy6g0039 6 628930 632416 Ahy12g1068 12 25039960 25046063 PCT
Ahy6g0039 6 628930 632416 Ahy2g0976 2 22394828 22400768 PCT
Ahy12g1068 12 25039960 25046063 Ahy6g0039 6 628930 632416 PCT
Ahy2g0976 2 22394828 22400768 Ahy6g0039 6 628930 632416 PCT