Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1442 ATGGCAACGATGTGGAATTCTTTATGCGTGGCCAATGGCACTCTCTTCAACTCTTCTTCTCCACTTCTTCCTCTTCGTTTCAATTCTAACTCCAACCTTCGATTTCGCCGCGCCACAATCACAAGCATGTGCGTTCCTGAAAACGACGTCGTTGTGATCGGTTACGGAATGACTACAGTTGACTTCTTGGCCACCGTTGACTCTTTTCCGAAGCCCGACGACAAGGTCCGCACCACCTCCTTCAAGGTTCAAGGAGGTGGCAATGCCGGCAACGCCTTAACCTGCGCCGCAAGACTCGGCTTGAAGCCTAAGCTCATCTCCAAGGTCGGCGACGATTCCCAAGGCCATGCTATTCTCAACGAGCTTCAGCGCGACGCCGTCGACACCTCCTTTGTCCTGGTATCAAAGGGTGGTAGTTCCGCGTTTTCGTATGTTCTAATCGACAACCAGACAAAAACTCGGACTAGTATTTACACCCCTGCACATCCTCCCATGATGCCAGATGATCAATCCCAATCAACCTTATTATCTGCATTTAATGAAGCAAGATTAGTGTATTTTGATGGACTGACTACCGATACTGCTCTATTCATTGCACAAGAGGCCGCTCGAAATAAGATACCGATTTTAGTTGAGGCCGAATCACCTAAGGAAGGATTGGATGAGCTTCTGAAACTTGCTGACTTTGCTGTATGCTCTGCAAGGTTTCCTAAGGCTTGGACACATGCATCATCTATCCCAAGTGCACTGGTTTCCATGCTTTTAAGATTGCCAAATATCAAATTTGTGATTGTGACTTTGGGTGAAGATGGATGTCTAATGTTGGAAAGAAGTGCAAACGAGGATGCTGATACAGAAGAAAATGATATAGATTGTTTCTTTGAATCCTTATATGAAAGGAAGGATGATAGCTTGGCTGTCCCAACCTGTATATCGTCGGGGGTGAAAAAATTTAGAGCAAACGGAAGAGGGACAGTTTGTGGAAGATTCTTTCTTGGAACAGCAGAGAGGATACCGGATGGTGAGCTGATTGATACAACTGGTGCTGGAGATGCATTTATTGGTGCTATTCTTTATGCAATCTGCACAAACATGGAACCAGAGAAAATGTTACCATTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGGGCTTTGGGAGCTAGAACTGGTCTTCCATATCTGGCAGATCCACGCCTAGCAGCCTATTTATGCTAG 1215 0.4609 MATMWNSLCVANGTLFNSSSPLLPLRFNSNSNLRFRRATITSMCVPENDVVVIGYGMTTVDFLATVDSFPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPKLISKVGDDSQGHAILNELQRDAVDTSFVLVSKGGSSAFSYVLIDNQTKTRTSIYTPAHPPMMPDDQSQSTLLSAFNEARLVYFDGLTTDTALFIAQEAARNKIPILVEAESPKEGLDELLKLADFAVCSARFPKAWTHASSIPSALVSMLLRLPNIKFVIVTLGEDGCLMLERSANEDADTEENDIDCFFESLYERKDDSLAVPTCISSGVKKFRANGRGTVCGRFFLGTAERIPDGELIDTTGAGDAFIGAILYAICTNMEPEKMLPFAAQVAAAKCRALGARTGLPYLADPRLAAYLC* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1442 404 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 33 403 - -
Ahy16g1442 404 Pfam pfkB family carbohydrate kinase 336 392 IPR011611 -
Ahy16g1442 404 Pfam pfkB family carbohydrate kinase 49 279 IPR011611 -
Ahy16g1442 404 Gene3D - 50 389 IPR029056 -
Ahy16g1442 404 SUPERFAMILY Ribokinase-like 49 395 IPR029056 -
Ahy16g1442 404 PRINTS Ribokinase signature 81 100 IPR002139 GO:0016301
Ahy16g1442 404 PRINTS Ribokinase signature 263 274 IPR002139 GO:0016301
Ahy16g1442 404 PRINTS Ribokinase signature 54 75 IPR002139 GO:0016301
Ahy16g1442 404 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 345 358 IPR002173 GO:0016773
Ahy16g1442 404 CDD ribokinase_group_B 51 393 - -
Ahy16g1442 404 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 33 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1442 Ahy-Chr16 29478398 29481855 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1442 - - gmx:100792838 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1442 16 29478398 29481855 Ahy6g0039 6 628930 632416 hybridization
Ahy16g1442 16 29478398 29481855 Ahy12g1068 12 25039960 25046063 PCT
Ahy16g1442 16 29478398 29481855 Ahy2g0976 2 22394828 22400768 PCT
Ahy12g1068 12 25039960 25046063 Ahy16g1442 16 29478398 29481855 PCT
Ahy2g0976 2 22394828 22400768 Ahy16g1442 16 29478398 29481855 PCT