Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0976 ATGTCCAACTCTCTCCTTCTTCTTCCTCTTCCTCCTTCTTCCTCTTCTTATTCTCAACCCCATTCACCTCTCACTCTCACTTTCTTTAATTCACGGAGGAAGAGACGCCCTTGCAGATATTCCAGAGCGACAATGTGCTCCTCTCATAATTCCCACCCCCCAAACGACGTCGTTGTTGGGTGTGGAGCGGCGTCGGTGGATTTCTTGGCTACCGTTGCTTCTTACCCTAACCCTGATGACAAAATCAGAAGCATCAACTTGAAGGTTCAAGGAGGTGGAAATGCAGGCAATGCTTTAACTTGTGTTGCTAGATTGGGCCTCAAGCCAAGGATCATCTCCAAAGTAGCAGATGATAGTCAAGGCAGGAGCATACTAGATGAGTTACACGCTGATGGTGTAGATGCATCCTTTATTGTGGTGTCTGAGGAGGGAACTTCACCATTTACATATATTATTGTGGACAACGAAACGAAGACCCGTACTTGCATACATACCCCAGGATATCCTCCAATGATACCACAGGATCTTTCTGAATCAAGTCTGTTAACTGCATTGAATGGAGCAAGCATTGCTTACTTTGATGGGAGGTTATATGAAACTGCTCTTGTTGTTGCCCAAGAGGCAGTTAGGAAGAATATACCCATCTTAGTTGATGCAGAAAGGCCAAGGGAAGGGTTGGATGATCTCCTGAAATTTGCTAATTATGTTGTATGCTCAGCAAAGTTTCCACTAGCATGGACAGGAGCATCAACTTTTCCACAAGCACTTGTTTCTATTCTCTTAAGATTGCTCAACATCAGATTTGTGATTGTGACCTTGGGAAAAGATGGTTGCATAATGCTCGAGAGAAATCTTGATGTAGCCTCTTCCACAGAGGAAGTGGATATAGACAGCTTAGTGGAGTCACTGAAGACGACAACGAATGAGAGTGTATTACACCCAACCTGTATATCATCGTCAGTGGCAACACTGAAGGCAGAAGGGATAGGAACAGTCAATGGGAGGATATATGTGGGAACAGCCGAGAGCATTCCTCCTTTGGAGCTTATTGACACCACTGGTGCCGGGGATGCATTTATTGGAGCTGTGATATATGCTATCTGTGCCAACTTTTCGCCAGAGACAATGCTTTCCTTTGCTGCTAATGTGGCAGCTGCCAAGTGTCGAGATTTAGGAGCTCGCAGTGGTCTTCCATATCGTGCTGACCCACGCATAGCTTCCTTCATGCAGTAG 1233 0.4542 MSNSLLLLPLPPSSSSYSQPHSPLTLTFFNSRRKRRPCRYSRATMCSSHNSHPPNDVVVGCGAASVDFLATVASYPNPDDKIRSINLKVQGGGNAGNALTCVARLGLKPRIISKVADDSQGRSILDELHADGVDASFIVVSEEGTSPFTYIIVDNETKTRTCIHTPGYPPMIPQDLSESSLLTALNGASIAYFDGRLYETALVVAQEAVRKNIPILVDAERPREGLDDLLKFANYVVCSAKFPLAWTGASTFPQALVSILLRLLNIRFVIVTLGKDGCIMLERNLDVASSTEEVDIDSLVESLKTTTNESVLHPTCISSSVATLKAEGIGTVNGRIYVGTAESIPPLELIDTTGAGDAFIGAVIYAICANFSPETMLSFAANVAAAKCRDLGARSGLPYRADPRIASFMQ* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0976 410 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 46 409 - -
Ahy2g0976 410 CDD ribokinase_group_B 57 399 - -
Ahy2g0976 410 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 351 364 IPR002173 GO:0016773
Ahy2g0976 410 Pfam pfkB family carbohydrate kinase 326 398 IPR011611 -
Ahy2g0976 410 Pfam pfkB family carbohydrate kinase 61 284 IPR011611 -
Ahy2g0976 410 Gene3D - 57 395 IPR029056 -
Ahy2g0976 410 PRINTS Ribokinase signature 60 81 IPR002139 GO:0016301
Ahy2g0976 410 PRINTS Ribokinase signature 87 106 IPR002139 GO:0016301
Ahy2g0976 410 PRINTS Ribokinase signature 269 280 IPR002139 GO:0016301
Ahy2g0976 410 SUPERFAMILY Ribokinase-like 58 402 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0976 Ahy-Chr2 22394828 22400768 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0976 - - mtr:MTR_1g069320 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1068 12 25039960 25046063 Ahy2g0976 2 22394828 22400768 hybridization
Ahy16g1442 16 29478398 29481855 Ahy2g0976 2 22394828 22400768 PCT
Ahy6g0039 6 628930 632416 Ahy2g0976 2 22394828 22400768 PCT
Ahy2g0976 2 22394828 22400768 Ahy16g1442 16 29478398 29481855 PCT
Ahy2g0976 2 22394828 22400768 Ahy6g0039 6 628930 632416 PCT