Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2591 ATGTGGAACTTTGCTTCGAATTGCATTGTTGGGAGTGTGGGTCAGAGAAACGATTGTGCAAGGCCTTCTCACGCTACTTCAGAATGTTCCGACGATGAGACTTCTATTGTGAGCAGAGAAGAAGGACTGGAATGTCCAATATGCTGGGAATCCTTTAACATTGTCGAAAATGTGCCTTATGTTTTGTGGTGCGGTCACACCCTATGTAAAAATTGCATCCTGGGACTGCAATGGGCTGTGGTTAAATTTCCAACACTTCCAATTCAGCTTCCACTTTTTATCTCCTGCCCATGGTGCAACCTTCTATCTTTCCGTTTAGTTTATCGGGGAAATCTGAAGTTCCCTCACAAGAACTACTTTCTTCTTTGGATGGTTGAGAGTATGAATGGTGATAGAGTGAAGACCCATTCAACTTCATATGGGGATCATCATCATCATCATCATCATCTAGTGTTTCCAAATAGGGACAATTTTGCTACAGGAAGCCAAGTAAGCCATGGCAACATTAGGAGGGGACAAGTTCTCCATCCAGAGTCATTGAGTTCCAATCGGTTTCATCACAATACTGGTAACTACCTCAGTATGGAAAGACTGCATACATCTATTCGCAAGTCCCTGGTTTTATTTGTTCACTTGACAGCAAAGTTCCCCTTGATCATCGTATTTCTTTTGATTGTCTTATATGCAATACCGGCCAGTGCAGCCATTTTGGCTCTGTATATACTTATTACCATTGTGTTTGCTCTCCCATCATTTCTCATCTTGTACTTTGCATATCCTAGTTTGGATTGGCTTATCAGGGAAATTATCACTTGA 816 0.4167 MWNFASNCIVGSVGQRNDCARPSHATSECSDDETSIVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPHKNYFLLWMVESMNGDRVKTHSTSYGDHHHHHHHLVFPNRDNFATGSQVSHGNIRRGQVLHPESLSSNRFHHNTGNYLSMERLHTSIRKSLVLFVHLTAKFPLIIVFLLIVLYAIPASAAILALYILITIVFALPSFLILYFAYPSLDWLIREIIT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2591 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 137 IPR013083 -
Ahy4g2591 271 PANTHER UBIQUITIN-PROTEIN LIGASE 1 271 - -
Ahy4g2591 271 SUPERFAMILY RING/U-box 36 101 - -
Ahy4g2591 271 ProSiteProfiles Zinc finger RING-type profile. 45 100 IPR001841 -
Ahy4g2591 271 PANTHER OS03G0211100 PROTEIN 1 271 - -
Ahy4g2591 271 Pfam RING-type zinc-finger 45 78 IPR027370 -
Ahy4g2591 271 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2591 Ahy-Chr4 123857276 123859766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2591 1 271 Miscellaneous Gene Families AT3G29270 61.397 5.21e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2591 - - adu:107486675 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2933 14 138092469 138094954 Ahy4g2591 4 123857276 123859766 hybridization
Ahy20g2616 20 135383708 135387232 Ahy4g2591 4 123857276 123859766 PCT
Ahy10g2125 10 109514930 109518392 Ahy4g2591 4 123857276 123859766 PCT
Ahy4g2591 4 123857276 123859766 Ahy20g2616 20 135383708 135387232 PCT
Ahy4g2591 4 123857276 123859766 Ahy10g2125 10 109514930 109518392 PCT