Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4193 ATGGGCACCAACCAGAGTGAGGTTGAGAGGAAGAGTGAGAAAGAGCTCAAGCATCTTGGCTTTGTGAGGATTGCAGCGATTCAAGCCTTTGTTTGCGTCTCAAATCTCTATCAATACGCCAAGCATAACTCTGGCCCTCTCAGATCTGCCGTTGGAACGGTTGAAGGGACTGTTTCCGCCGTTCTCGGCCCCGTATACAACAAATTCAGGGATGTCCCCGACGATCTCCTTGTTTTTGTCGATAACAAGGTGGATGAAGCTAGCCAGAAATTCGAGGAGCATGCACCTCCATTAGTGAAGCAGGTAGCAAGGCAAGCAAAGGGGTTGATTGAGGAAGTGACACAGAAAGCAGAGAAGGTTGTGAGTGAGGCTCAATCCGGAGGAGCAAAAGCAGCTGCACATTATGTTGCTGAGGAGTCCAAGCACATTGTGCTAACTGGCTCAGTTAAATTGTGGAACGGTCTAAACCACTATCAACTGTTCCATGCAGTGGCAGAGATGGCTGTTCCCACTGCTGCACACTGGTTGGAAAGCTACAACCATGTGGTTGAGGACATGACTGCTAAGGGTTATGGTGTTTTTCAGTATTTGCCTTTGGTTCCAATTGATGAGATAGCCAAGGCATTTAAACAGGGAAAAGGAGAAGCGAATGTCAATGAGAATGGAGATGGAGGTGTCATTACTGGACAGATAGCACAATCTGAGTAA 708 0.4746 MGTNQSEVERKSEKELKHLGFVRIAAIQAFVCVSNLYQYAKHNSGPLRSAVGTVEGTVSAVLGPVYNKFRDVPDDLLVFVDNKVDEASQKFEEHAPPLVKQVARQAKGLIEEVTQKAEKVVSEAQSGGAKAAAHYVAEESKHIVLTGSVKLWNGLNHYQLFHAVAEMAVPTAAHWLESYNHVVEDMTAKGYGVFQYLPLVPIDEIAKAFKQGKGEANVNENGDGGVITGQIAQSE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4193 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 5 218 IPR008802 -
Ahy3g4193 235 PANTHER RUBBER ELONGATION FACTOR-RELATED 5 218 - -
Ahy3g4193 235 Pfam Rubber elongation factor protein (REF) 11 211 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4193 Ahy-Chr3 141912326 141914119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4193 - - gmx:100499806 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4476 13 144921056 144922834 Ahy3g4193 3 141912326 141914119 hybridization
Ahy20g0960 20 13587660 13589739 Ahy3g4193 3 141912326 141914119 PCT
Ahy10g0676 10 7361020 7363182 Ahy3g4193 3 141912326 141914119 PCT
Ahy3g4193 3 141912326 141914119 Ahy20g0960 20 13587660 13589739 PCT
Ahy3g4193 3 141912326 141914119 Ahy10g0676 10 7361020 7363182 PCT